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The map label for this gene is yfhF [C]

Identifier: 209549488

GI number: 209549488

Start: 1939032

End: 1939424

Strand: Reverse

Name: yfhF [C]

Synonym: Rleg2_1894

Alternate gene names: 209549488

Gene position: 1939424-1939032 (Counterclockwise)

Preceding gene: 209549489

Following gene: 209549482

Centisome position: 42.74

GC content: 65.14

Gene sequence:

>393_bases
ATGGGCTTTGCAGTGATGAGCATGACGGACGGGGCCGCGGCCCGCGTCAAGGCGATCGTCGAGAATTCCGGCCCGGAGGC
CAAGGGTGTTCGCGTCGGAATCAAGAAGGGCGGCTGCGCCGGGATGGAATATACGATCGACCTGGTGACCGAGCCCAATG
CCAAGGACGATCTGATCGAGCGCGACGGCGCCAGGGTCTGGGTCGAACCGTCAGCCGTGCTCTATCTGCTCGGCACCGAA
ATGGGCTTCGAGCAGACGACGCTGCGCTCCGGCTTCACCTTCACCAACCCGAACCAGACATCGGCCTGCGGCTGCGGCGA
ATCCGTCGAGCTGAAGCCCGCCGATCTCGCGGCCCTTGCCGCACAGCGCCAGAGTGAGCCGGCGCATTCTTGA

Upstream 100 bases:

>100_bases
GGTATTAATGCGCCGGTATTGATCCGTTTACCTCGGGCGACTACATTTTGAATCATGAAGCACCGGATCTTGACCCCGGT
TGTGGAAGGAGAATGGGCCG

Downstream 100 bases:

>100_bases
GCCGTTAAAACGGCCACCGGCGCTACATCAGTGGCCGCGTAGCGTTGCGAAAGAGCGCTTAATCGCGCTTGATGCTCATC
AGCATTTCCCACATGTCGGC

Product: FeS assembly scaffold SufA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MGFAVMSMTDGAAARVKAIVENSGPEAKGVRVGIKKGGCAGMEYTIDLVTEPNAKDDLIERDGARVWVEPSAVLYLLGTE
MGFEQTTLRSGFTFTNPNQTSACGCGESVELKPADLAALAAQRQSEPAHS

Sequences:

>Translated_130_residues
MGFAVMSMTDGAAARVKAIVENSGPEAKGVRVGIKKGGCAGMEYTIDLVTEPNAKDDLIERDGARVWVEPSAVLYLLGTE
MGFEQTTLRSGFTFTNPNQTSACGCGESVELKPADLAALAAQRQSEPAHS
>Mature_129_residues
GFAVMSMTDGAAARVKAIVENSGPEAKGVRVGIKKGGCAGMEYTIDLVTEPNAKDDLIERDGARVWVEPSAVLYLLGTEM
GFEQTTLRSGFTFTNPNQTSACGCGESVELKPADLAALAAQRQSEPAHS

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=108, Percent_Identity=38.8888888888889, Blast_Score=91, Evalue=2e-19,
Organism=Homo sapiens, GI160420328, Length=108, Percent_Identity=32.4074074074074, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=39.622641509434, Blast_Score=92, Evalue=9e-21,
Organism=Escherichia coli, GI1787974, Length=104, Percent_Identity=40.3846153846154, Blast_Score=87, Evalue=4e-19,
Organism=Escherichia coli, GI1786351, Length=106, Percent_Identity=33.9622641509434, Blast_Score=71, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193209025, Length=108, Percent_Identity=36.1111111111111, Blast_Score=94, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25146411, Length=108, Percent_Identity=36.1111111111111, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6323001, Length=105, Percent_Identity=34.2857142857143, Blast_Score=85, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24642263, Length=108, Percent_Identity=37.962962962963, Blast_Score=96, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 13667; Mature: 13535

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFAVMSMTDGAAARVKAIVENSGPEAKGVRVGIKKGGCAGMEYTIDLVTEPNAKDDLIE
CCEEEEEECCCCHHHEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCHHHC
RDGARVWVEPSAVLYLLGTEMGFEQTTLRSGFTFTNPNQTSACGCGESVELKPADLAALA
CCCCEEEECCCEEEEEEECCCCCCCHHHCCCCEECCCCCCCCCCCCCCCEECCHHHHHHH
AQRQSEPAHS
HHHCCCCCCC
>Mature Secondary Structure 
GFAVMSMTDGAAARVKAIVENSGPEAKGVRVGIKKGGCAGMEYTIDLVTEPNAKDDLIE
CEEEEEECCCCHHHEEEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCHHHC
RDGARVWVEPSAVLYLLGTEMGFEQTTLRSGFTFTNPNQTSACGCGESVELKPADLAALA
CCCCEEEECCCEEEEEEECCCCCCCHHHCCCCEECCCCCCCCCCCCCCCEECCHHHHHHH
AQRQSEPAHS
HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]