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The map label for this gene is ydjA [H]

Identifier: 209549437

GI number: 209549437

Start: 1892132

End: 1892716

Strand: Reverse

Name: ydjA [H]

Synonym: Rleg2_1843

Alternate gene names: 209549437

Gene position: 1892716-1892132 (Counterclockwise)

Preceding gene: 209549439

Following gene: 209549436

Centisome position: 41.71

GC content: 62.91

Gene sequence:

>585_bases
ATGAAATCCGATATCAAGCTGATCGATTACCTCGCCGTACGCCGCTCCATCCCCGCTTTCCAGATGTGCGAACCAGGCCC
CGAAAAGGCCGAAATCGAGGAAATTCTACGTCTTGCCTCGCGAGTTCCCGATCACGGCAAGATCGCGCCGTGGCGCTTCA
TCGTCTATCGCGGAGGCGAGCGCGCTCGCCTCGGTGAGGAGCTTCTGGCCTTGGCGCTCGAGACGAAGCCTGAGCTTTCC
GAAGAGATGATCCAGGTGGAACGCGCGCGTTTCACCCGCGCGCCCGTGGTGGTCGCCGTCGTCAGCAAGGCGGGGCCGCA
TATCAAGATCCCCGAATGGGAGCAACTGATGTCGGCCGGCGCGCTCTGCCTCAACGTCATCCTTGCCGCCAATGCCAGCG
GTTATGTCGCCAACTGGCTGACGGAGTGGTTCGCCTATGACGAACGCGCCTATCCGCTGCTCGGCGTCGGGCCTGATGAA
AAGGTGGCGGGCTTCATCCATATCGGCTCGACGACATTTCCGGCGATCGAGCGGCCGCGGCCGGAACTTGCCGATACCGT
GACCTGGGTCGGCGGGGAGGGCTGA

Upstream 100 bases:

>100_bases
CAATTGACTTCTGAAATCGCAAAGGCCACTTCAAGACCAACGCGATGGCAAATTCAAGACCCAGCCTTTGCAGCAGCATA
AAAATGAGAGTTTCTCCCGC

Downstream 100 bases:

>100_bases
TGTTTTACACCACTGACGAAAACCGGCACGGGCTGGCGCATGATCCGTTCAAGGCGATCGTGTCGCCGCGCCCGATCGGC
TGGATCGGCAGTAAGGGCAG

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MKSDIKLIDYLAVRRSIPAFQMCEPGPEKAEIEEILRLASRVPDHGKIAPWRFIVYRGGERARLGEELLALALETKPELS
EEMIQVERARFTRAPVVVAVVSKAGPHIKIPEWEQLMSAGALCLNVILAANASGYVANWLTEWFAYDERAYPLLGVGPDE
KVAGFIHIGSTTFPAIERPRPELADTVTWVGGEG

Sequences:

>Translated_194_residues
MKSDIKLIDYLAVRRSIPAFQMCEPGPEKAEIEEILRLASRVPDHGKIAPWRFIVYRGGERARLGEELLALALETKPELS
EEMIQVERARFTRAPVVVAVVSKAGPHIKIPEWEQLMSAGALCLNVILAANASGYVANWLTEWFAYDERAYPLLGVGPDE
KVAGFIHIGSTTFPAIERPRPELADTVTWVGGEG
>Mature_194_residues
MKSDIKLIDYLAVRRSIPAFQMCEPGPEKAEIEEILRLASRVPDHGKIAPWRFIVYRGGERARLGEELLALALETKPELS
EEMIQVERARFTRAPVVVAVVSKAGPHIKIPEWEQLMSAGALCLNVILAANASGYVANWLTEWFAYDERAYPLLGVGPDE
KVAGFIHIGSTTFPAIERPRPELADTVTWVGGEG

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=168, Percent_Identity=30.952380952381, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 21494; Mature: 21494

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDIKLIDYLAVRRSIPAFQMCEPGPEKAEIEEILRLASRVPDHGKIAPWRFIVYRGGE
CCCCHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
RARLGEELLALALETKPELSEEMIQVERARFTRAPVVVAVVSKAGPHIKIPEWEQLMSAG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHH
ALCLNVILAANASGYVANWLTEWFAYDERAYPLLGVGPDEKVAGFIHIGSTTFPAIERPR
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCC
PELADTVTWVGGEG
CHHHHHEEECCCCC
>Mature Secondary Structure
MKSDIKLIDYLAVRRSIPAFQMCEPGPEKAEIEEILRLASRVPDHGKIAPWRFIVYRGGE
CCCCHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC
RARLGEELLALALETKPELSEEMIQVERARFTRAPVVVAVVSKAGPHIKIPEWEQLMSAG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHH
ALCLNVILAANASGYVANWLTEWFAYDERAYPLLGVGPDEKVAGFIHIGSTTFPAIERPR
HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCEEEEEEECCCCCCCCCCCC
PELADTVTWVGGEG
CHHHHHEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]