| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is pyrG [H]
Identifier: 209549426
GI number: 209549426
Start: 1879947
End: 1881575
Strand: Reverse
Name: pyrG [H]
Synonym: Rleg2_1832
Alternate gene names: 209549426
Gene position: 1881575-1879947 (Counterclockwise)
Preceding gene: 209549427
Following gene: 209549425
Centisome position: 41.46
GC content: 62.86
Gene sequence:
>1629_bases ATGGCGCGATACGTATTCATCACTGGCGGCGTGGTTTCCTCTCTCGGAAAAGGAATTGCGGCCGCGGCTCTCGGAGCGTT GCTGCAGGCCCGTGGATATCGGGTACGGCTTCGCAAGCTCGACCCCTATCTGAACGTGGACCCGGGCACGATGAGCCCGA CCCAGCACGGCGAGGTCTTCGTCACCGACGACGGCGCGGAAACCGATCTCGATCTCGGCCACTATGAACGCTTCACGGGG CGTTCGGCGACCAAGACCGACAACATCACCACCGGCCGCATCTACAAGAACATCATCGACAAGGAACGGCGCGGCGACTA TCTCGGCGCGACGGTGCAGGTCATTCCGCACGTCACCAACGAGATCAAGGATTTCGTCATCGAGGGCAATGACGACTACG ACTTCGTCATCTGCGAGATCGGCGGCACGGTCGGCGACATCGAGGCGATGCCCTTCATGGAGGCGATCCGCCAGCTCGGC AACGACCTGCCGCGCGGCACCGCGGTCTACGTCCACCTGACGCTGATGCCCTATATTCCGGCCGCCGGCGAGCTCAAGAC CAAGCCGACCCAGCATTCGGTCAAGGAACTGCAGGCGCTCGGCATTCATCCCGATATTCTGCTGGTGCGCGCCGACCGCG AAATTCCGGAAGCCGAGCGCCGCAAGCTTTCGCTGTTCTGCAACGTGCGCCCGTCCGCCGTCATCCAGGCGCTCGACGTC GCCAACATCTACGATGTGCCGATTGCCTACCACAAGGAAGGCCTTGATGACGAAGTGCTGGCAGCCTTCGGCATCGAGCC GGCGCCGAAGCCGCGTCTCGACCCGTGGGAAGAGGTCTGCAACCGTATCCGCACGCCTGAGGGCGAGGTGACGATCGCGA TCGTCGGCAAATATACCGGCCTCAAGGATGCCTATAAATCGCTGATCGAGGCGCTGCACCACGGCGGCATCGCCAATCGC GTCAAGGTCAAGCTCGAATGGATCGAGTCCGAGGTCTTCGAAAAGGAAGATCCGGCGCCGTACCTCGAAAAGGTGCACGG CATCCTCGTGCCGGGCGGCTTCGGCGAACGCGGTTCGGAAGGCAAGATCCACGCAGCGCGTTTCGCCCGCGAGCGCAAGG TGCCGTATTTCGGCATCTGCTTCGGCATGCAGATGGCCGTCATCGAGGCGGCGCGCAATCTCGCCGACGTATCCGGCGCC TCCTCGACCGAATTCGGCCCGACCAAGGAGCCGGTGGTCGGCCTGATGACCGAATGGGTCAAGGGCAACGAGTTGCAGAA GCGCACGGCAGCCGGCGATCTCGGCGGCACGATGCGCCTCGGCGCCTATAAGGCGGCGCTGAAGAAGGGCACGAAGATCT CGGATATCTACGGTTCCACCGATATTTCCGAGCGGCATCGCCACCGCTACGAGGTCAATGTCGACTACAAGGACCGGCTC GAGAGCTGCGGCCTCGTCTTCTCCGGCATGTCGCCGGATGGTGTGCTGCCGGAGACGATCGAATATCCGGATCACCCGTG GTTCATCGGCGTGCAGTATCACCCGGAACTGAAGAGCCGGCCGCTCGACCCGCATCCGCTGTTTGCCAGCTTCATCGAAG CGGCGACGGAACAGAGCCGCCTCGTCTAA
Upstream 100 bases:
>100_bases GTTTTCTTTTGTTCAGATTCCTTCGCCACGCTCCGAAAATTCCGGAAAAGAGTTTTTGGGGCTGGTGGAATCGTTTTTGA AAAGGTATCCGGTGAATCCC
Downstream 100 bases:
>100_bases TCACGATGAAGATCCAGATCGCGCGACGTCAAGCGCGATCTGGGCAAGTGCTTGTGGTGCTCTATATCGCCGGCATGGCC ATCCGACGCAGCACGACCGT
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 542; Mature: 541
Protein sequence:
>542_residues MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTG RSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEIKDFVIEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLG NDLPRGTAVYVHLTLMPYIPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQALDV ANIYDVPIAYHKEGLDDEVLAAFGIEPAPKPRLDPWEEVCNRIRTPEGEVTIAIVGKYTGLKDAYKSLIEALHHGGIANR VKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERGSEGKIHAARFARERKVPYFGICFGMQMAVIEAARNLADVSGA SSTEFGPTKEPVVGLMTEWVKGNELQKRTAAGDLGGTMRLGAYKAALKKGTKISDIYGSTDISERHRHRYEVNVDYKDRL ESCGLVFSGMSPDGVLPETIEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAATEQSRLV
Sequences:
>Translated_542_residues MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTG RSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEIKDFVIEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLG NDLPRGTAVYVHLTLMPYIPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQALDV ANIYDVPIAYHKEGLDDEVLAAFGIEPAPKPRLDPWEEVCNRIRTPEGEVTIAIVGKYTGLKDAYKSLIEALHHGGIANR VKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERGSEGKIHAARFARERKVPYFGICFGMQMAVIEAARNLADVSGA SSTEFGPTKEPVVGLMTEWVKGNELQKRTAAGDLGGTMRLGAYKAALKKGTKISDIYGSTDISERHRHRYEVNVDYKDRL ESCGLVFSGMSPDGVLPETIEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAATEQSRLV >Mature_541_residues ARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVFVTDDGAETDLDLGHYERFTGR SATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTNEIKDFVIEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGN DLPRGTAVYVHLTLMPYIPAAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQALDVA NIYDVPIAYHKEGLDDEVLAAFGIEPAPKPRLDPWEEVCNRIRTPEGEVTIAIVGKYTGLKDAYKSLIEALHHGGIANRV KVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERGSEGKIHAARFARERKVPYFGICFGMQMAVIEAARNLADVSGAS STEFGPTKEPVVGLMTEWVKGNELQKRTAAGDLGGTMRLGAYKAALKKGTKISDIYGSTDISERHRHRYEVNVDYKDRLE SCGLVFSGMSPDGVLPETIEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAATEQSRLV
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=557, Percent_Identity=44.165170556553, Blast_Score=466, Evalue=1e-131, Organism=Homo sapiens, GI28559085, Length=563, Percent_Identity=43.6944937833037, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI28559083, Length=563, Percent_Identity=43.6944937833037, Blast_Score=455, Evalue=1e-128, Organism=Homo sapiens, GI221316689, Length=563, Percent_Identity=43.6944937833037, Blast_Score=455, Evalue=1e-128, Organism=Escherichia coli, GI1789142, Length=536, Percent_Identity=56.1567164179104, Blast_Score=589, Evalue=1e-169, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=36.7816091954023, Blast_Score=394, Evalue=1e-110, Organism=Saccharomyces cerevisiae, GI6322563, Length=570, Percent_Identity=40.8771929824561, Blast_Score=424, Evalue=1e-119, Organism=Saccharomyces cerevisiae, GI6319432, Length=567, Percent_Identity=41.0934744268078, Blast_Score=422, Evalue=1e-119, Organism=Drosophila melanogaster, GI24664469, Length=559, Percent_Identity=43.649373881932, Blast_Score=445, Evalue=1e-125, Organism=Drosophila melanogaster, GI21357815, Length=505, Percent_Identity=42.970297029703, Blast_Score=383, Evalue=1e-106,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 59853; Mature: 59722
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF CCEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EIKDFVIEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLPRGTAVYVHLTLMPYIP HHHHEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC AAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQALDV CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCEEEEEEECCHHHHHHHHHH ANIYDVPIAYHKEGLDDEVLAAFGIEPAPKPRLDPWEEVCNRIRTPEGEVTIAIVGKYTG CCEECCCHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC LKDAYKSLIEALHHGGIANRVKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERGSE HHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHCEEEECCCCCCCCCC GKIHAARFARERKVPYFGICFGMQMAVIEAARNLADVSGASSTEFGPTKEPVVGLMTEWV CCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH KGNELQKRTAAGDLGGTMRLGAYKAALKKGTKISDIYGSTDISERHRHRYEVNVDYKDRL CCCHHHHHHHCCCCCCCEEHHHHHHHHHCCCEEEECCCCCCHHHHHCCEEEEECCHHHHH ESCGLVFSGMSPDGVLPETIEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAATEQSR HHCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHC LV CC >Mature Secondary Structure ARYVFITGGVVSSLGKGIAAAALGALLQARGYRVRLRKLDPYLNVDPGTMSPTQHGEVF CEEEEEECHHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFTGRSATKTDNITTGRIYKNIIDKERRGDYLGATVQVIPHVTN EECCCCCCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EIKDFVIEGNDDYDFVICEIGGTVGDIEAMPFMEAIRQLGNDLPRGTAVYVHLTLMPYIP HHHHEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCC AAGELKTKPTQHSVKELQALGIHPDILLVRADREIPEAERRKLSLFCNVRPSAVIQALDV CCCCCCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHCEEEEEEECCHHHHHHHHHH ANIYDVPIAYHKEGLDDEVLAAFGIEPAPKPRLDPWEEVCNRIRTPEGEVTIAIVGKYTG CCEECCCHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC LKDAYKSLIEALHHGGIANRVKVKLEWIESEVFEKEDPAPYLEKVHGILVPGGFGERGSE HHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHCCCCCCHHHHHHCEEEECCCCCCCCCC GKIHAARFARERKVPYFGICFGMQMAVIEAARNLADVSGASSTEFGPTKEPVVGLMTEWV CCCHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH KGNELQKRTAAGDLGGTMRLGAYKAALKKGTKISDIYGSTDISERHRHRYEVNVDYKDRL CCCHHHHHHHCCCCCCCEEHHHHHHHHHCCCEEEECCCCCCHHHHHCCEEEEECCHHHHH ESCGLVFSGMSPDGVLPETIEYPDHPWFIGVQYHPELKSRPLDPHPLFASFIEAATEQSR HHCCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCHHCCCCCCCHHHHHHHHHHHHHHC LV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]