| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is deaD [H]
Identifier: 209549420
GI number: 209549420
Start: 1872479
End: 1874458
Strand: Reverse
Name: deaD [H]
Synonym: Rleg2_1826
Alternate gene names: 209549420
Gene position: 1874458-1872479 (Counterclockwise)
Preceding gene: 209549421
Following gene: 209549419
Centisome position: 41.31
GC content: 65.05
Gene sequence:
>1980_bases ATGACAGAATTCAACGGCGTCGTTCCGGCGATCGCCAAGGCGTTGCAGAAGCGCGGTTACGCCGAACTCACCCCGGTGCA GAAGGCAATGCTCGATCCGGCGCTCGCCGCTTCCGACGCGCTGGTCTCGGCCCAGACCGGTTCCGGCAAGACCGTCGCCT TCGGCCTGGCGCTGGCGCCGACGCTGCTCGAGGGCGGAGAGCGCTTCGGCAATGCCGGCGCGCCGCTTGCGCTTGTCATC GCCCCGACGCGCGAACTTGCCCTGCAGGTCAAGCGTGAGCTCGAATGGCTCTACGAAATGACCGGCGCGGTGATCGCCAG CTGCGTCGGCGGCATGGACATCCGCAGCGAGCGCCGCTCGCTCGAACGCGGCGCCCATATCGTCGTCGGCACGCCGGGCC GCCTCTGCGACCATATCCGCCGCAGGGCGCTCGACATGTCTGAACTGAAGGCCGCCGTGCTCGACGAGGCCGACGAGATG CTCGATCTCGGCTTCCGCGAAGATCTGGAATTCATTCTCGATTCGGCGCCGGACGAGCGCCGGACGCTGATGTTTTCGGC AACGGTGCCGGCGGCGATCGCCAAGCTTGCCAAAAGCTATCAACGCAACGCCGTGCGCATCAGCACCGCGGCTGAGGCAA AGCAGCATGTCGATATTGAATATCGCGCGCTGATGGTGGCCCCCAGCGACCGCGAGAATGCGATCATCAACGTGCTGCGT TATTACGAGGCGACCAACGCCATCGTCTTCTGCTCGACGCGTGCGGCCGTCAATCATCTGACCGCTCGCTTCAACAACCG CAATTTCTCCGTCGTAGCGCTTTCCGGCGAGCTGACGCAGAACGAACGCACCCATGCGCTGCAGGCGATGCGCGACGGGC GCGCCCGCGTCTGCATCGCAACCGACGTCGCTGCTCGCGGCATCGACCTGCCGGGTCTCGATCTGGTCATCCATGCCGAC CTGCCGACCAATCCGGACACGCTACTGCACCGCAGCGGCCGCACCGGCCGGGCCGGACGCAAGGGCATCAGCGCCATGAT CGTGCCGCTGAATGCACGGCGCAAGGCCGAGCGCCTGCTTGAAAATGCCGGCATTTCCGCCGCCTGGGCGCGGCCGCCGT CGGCCGAAGAGGTAAACGAGCGCGACGACGAACGGCTGCTTGCCGATCCGATCTTCAGCGAAGCGCCGCAGGAGGAAGAA CAGGGGCTGGTGCAGCAGCTGCTTTCCAGCCACGGCGCCGAAAAGCTCGCCGCCGCTTTCCTGCGTCTTTACCGTACCAA CCATTCGGCGCCGGAAGACCTTCTCGAGGTTACCGTGCAGGACGGGGGCAGCCGCAAGCGCCGCGACAATGCCGAGCCGT TCGAGCCGGCACAGAGGGGACCGCGCGAGGATTTCGGCGCCAGCGTCTGGTTCTCCGTTTCGGTCGGACGCAAGCAGAAT GCCGAGCCGCGCTGGCTGATTCCGATGCTCTGCCGCAACGGCAATGTGACGAAGCGCGAGATCGGTGCGATCAAGATGCA GCCTGAGGAAACCTTTGTGGAGATCGCAGCAGCGAGTGCCGAAAGCTTCCTGGCAGCGATCGGACCGAACAAGGCGCTCG AACGCGGCATCCGTGTGACCAAGCTTTCCGGCACGCCGGATTTCAGCCGGGCGCCGTCGCCGAAGCCCTATGCCGGCAAG CCGTCGCGTGACGAGCGACCGGGCGACACGTTCCGCGAGGAACGCCGCAACAATAAGTTCGGCAAGGCTCCGGGCGGCGG ATATGCAGCAGCCGACAATAGCGGCCAGCAAAGACAGGATAGCTGGAGCAAGAAGCCCGGCAAGCCCGGCTTCGATGGCC CGAAATTCGACAAGCCGAAATACGACAAGCCGAAATTCGAAGGCGGCAAATCCGAAGGCGCCAAATCCGAACGCCCGAAA TTCGAGGGCAAGGGCGGCGCCGGGGCGAAGGGCAAGTTTTCGAAGAAGAAGCCCGGCTGA
Upstream 100 bases:
>100_bases GACAATCGCCGCCGGAGCGGCTAGGAACGGCGCAAATACCCCGCCGGCTGGCTCCGGCCATGGCGCAATTCGCGCCTGAC AGCTCCGAAAGATCGAACTC
Downstream 100 bases:
>100_bases TTGCGCCGGCAGCCCTTCGCCGGGTGAGGCGGAGGGCTTTATCAAGGCCGATAAGTGCTCCAGGAGCATTTCGGCTTCGT CGCGTGCGACGACGTGGAAT
Product: DEAD/DEAH box helicase
Products: NA
Alternate protein names: ATP-dependent RNA helicase deaD homolog [H]
Number of amino acids: Translated: 659; Mature: 658
Protein sequence:
>659_residues MTEFNGVVPAIAKALQKRGYAELTPVQKAMLDPALAASDALVSAQTGSGKTVAFGLALAPTLLEGGERFGNAGAPLALVI APTRELALQVKRELEWLYEMTGAVIASCVGGMDIRSERRSLERGAHIVVGTPGRLCDHIRRRALDMSELKAAVLDEADEM LDLGFREDLEFILDSAPDERRTLMFSATVPAAIAKLAKSYQRNAVRISTAAEAKQHVDIEYRALMVAPSDRENAIINVLR YYEATNAIVFCSTRAAVNHLTARFNNRNFSVVALSGELTQNERTHALQAMRDGRARVCIATDVAARGIDLPGLDLVIHAD LPTNPDTLLHRSGRTGRAGRKGISAMIVPLNARRKAERLLENAGISAAWARPPSAEEVNERDDERLLADPIFSEAPQEEE QGLVQQLLSSHGAEKLAAAFLRLYRTNHSAPEDLLEVTVQDGGSRKRRDNAEPFEPAQRGPREDFGASVWFSVSVGRKQN AEPRWLIPMLCRNGNVTKREIGAIKMQPEETFVEIAAASAESFLAAIGPNKALERGIRVTKLSGTPDFSRAPSPKPYAGK PSRDERPGDTFREERRNNKFGKAPGGGYAAADNSGQQRQDSWSKKPGKPGFDGPKFDKPKYDKPKFEGGKSEGAKSERPK FEGKGGAGAKGKFSKKKPG
Sequences:
>Translated_659_residues MTEFNGVVPAIAKALQKRGYAELTPVQKAMLDPALAASDALVSAQTGSGKTVAFGLALAPTLLEGGERFGNAGAPLALVI APTRELALQVKRELEWLYEMTGAVIASCVGGMDIRSERRSLERGAHIVVGTPGRLCDHIRRRALDMSELKAAVLDEADEM LDLGFREDLEFILDSAPDERRTLMFSATVPAAIAKLAKSYQRNAVRISTAAEAKQHVDIEYRALMVAPSDRENAIINVLR YYEATNAIVFCSTRAAVNHLTARFNNRNFSVVALSGELTQNERTHALQAMRDGRARVCIATDVAARGIDLPGLDLVIHAD LPTNPDTLLHRSGRTGRAGRKGISAMIVPLNARRKAERLLENAGISAAWARPPSAEEVNERDDERLLADPIFSEAPQEEE QGLVQQLLSSHGAEKLAAAFLRLYRTNHSAPEDLLEVTVQDGGSRKRRDNAEPFEPAQRGPREDFGASVWFSVSVGRKQN AEPRWLIPMLCRNGNVTKREIGAIKMQPEETFVEIAAASAESFLAAIGPNKALERGIRVTKLSGTPDFSRAPSPKPYAGK PSRDERPGDTFREERRNNKFGKAPGGGYAAADNSGQQRQDSWSKKPGKPGFDGPKFDKPKYDKPKFEGGKSEGAKSERPK FEGKGGAGAKGKFSKKKPG >Mature_658_residues TEFNGVVPAIAKALQKRGYAELTPVQKAMLDPALAASDALVSAQTGSGKTVAFGLALAPTLLEGGERFGNAGAPLALVIA PTRELALQVKRELEWLYEMTGAVIASCVGGMDIRSERRSLERGAHIVVGTPGRLCDHIRRRALDMSELKAAVLDEADEML DLGFREDLEFILDSAPDERRTLMFSATVPAAIAKLAKSYQRNAVRISTAAEAKQHVDIEYRALMVAPSDRENAIINVLRY YEATNAIVFCSTRAAVNHLTARFNNRNFSVVALSGELTQNERTHALQAMRDGRARVCIATDVAARGIDLPGLDLVIHADL PTNPDTLLHRSGRTGRAGRKGISAMIVPLNARRKAERLLENAGISAAWARPPSAEEVNERDDERLLADPIFSEAPQEEEQ GLVQQLLSSHGAEKLAAAFLRLYRTNHSAPEDLLEVTVQDGGSRKRRDNAEPFEPAQRGPREDFGASVWFSVSVGRKQNA EPRWLIPMLCRNGNVTKREIGAIKMQPEETFVEIAAASAESFLAAIGPNKALERGIRVTKLSGTPDFSRAPSPKPYAGKP SRDERPGDTFREERRNNKFGKAPGGGYAAADNSGQQRQDSWSKKPGKPGFDGPKFDKPKYDKPKFEGGKSEGAKSERPKF EGKGGAGAKGKFSKKKPG
Specific function: Has a helix-destabilizing activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI13129006, Length=377, Percent_Identity=35.2785145888594, Blast_Score=223, Evalue=3e-58, Organism=Homo sapiens, GI50659095, Length=389, Percent_Identity=34.1902313624679, Blast_Score=213, Evalue=4e-55, Organism=Homo sapiens, GI20149629, Length=344, Percent_Identity=32.2674418604651, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI7661920, Length=348, Percent_Identity=32.7586206896552, Blast_Score=207, Evalue=3e-53, Organism=Homo sapiens, GI21071032, Length=387, Percent_Identity=31.7829457364341, Blast_Score=199, Evalue=8e-51, Organism=Homo sapiens, GI216548263, Length=380, Percent_Identity=31.5789473684211, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI13518015, Length=380, Percent_Identity=31.5789473684211, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI41327771, Length=369, Percent_Identity=31.7073170731707, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI262231852, Length=380, Percent_Identity=31.5789473684211, Blast_Score=196, Evalue=5e-50, Organism=Homo sapiens, GI41327773, Length=382, Percent_Identity=30.6282722513089, Blast_Score=195, Evalue=9e-50, Organism=Homo sapiens, GI262118318, Length=372, Percent_Identity=32.258064516129, Blast_Score=195, Evalue=1e-49, Organism=Homo sapiens, GI83700235, Length=327, Percent_Identity=34.8623853211009, Blast_Score=194, Evalue=3e-49, Organism=Homo sapiens, GI4503529, Length=326, Percent_Identity=34.0490797546012, Blast_Score=193, Evalue=4e-49, Organism=Homo sapiens, GI222352149, Length=361, Percent_Identity=33.5180055401662, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI301171467, Length=343, Percent_Identity=33.5276967930029, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI87196351, Length=343, Percent_Identity=33.5276967930029, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI301171475, Length=343, Percent_Identity=33.5276967930029, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI169881239, Length=343, Percent_Identity=33.2361516034985, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI13514809, Length=343, Percent_Identity=33.2361516034985, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI45446747, Length=345, Percent_Identity=31.304347826087, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI45446743, Length=345, Percent_Identity=31.304347826087, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI224593278, Length=359, Percent_Identity=31.4763231197772, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI148613856, Length=363, Percent_Identity=32.5068870523416, Blast_Score=183, Evalue=6e-46, Organism=Homo sapiens, GI38201710, Length=363, Percent_Identity=32.5068870523416, Blast_Score=183, Evalue=6e-46, Organism=Homo sapiens, GI188035877, Length=346, Percent_Identity=30.9248554913295, Blast_Score=180, Evalue=3e-45, Organism=Homo sapiens, GI31542656, Length=351, Percent_Identity=32.7635327635328, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI4758138, Length=357, Percent_Identity=29.9719887955182, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI164664518, Length=347, Percent_Identity=29.1066282420749, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI38327634, Length=340, Percent_Identity=32.3529411764706, Blast_Score=170, Evalue=4e-42, Organism=Homo sapiens, GI41327779, Length=362, Percent_Identity=32.5966850828729, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI13514831, Length=359, Percent_Identity=32.033426183844, Blast_Score=169, Evalue=9e-42, Organism=Homo sapiens, GI41327776, Length=344, Percent_Identity=30.8139534883721, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI21040371, Length=344, Percent_Identity=29.3604651162791, Blast_Score=168, Evalue=2e-41, Organism=Homo sapiens, GI51094101, Length=347, Percent_Identity=30.5475504322767, Blast_Score=166, Evalue=8e-41, Organism=Homo sapiens, GI164419743, Length=347, Percent_Identity=30.5475504322767, Blast_Score=166, Evalue=8e-41, Organism=Homo sapiens, GI4758112, Length=348, Percent_Identity=28.735632183908, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI18375623, Length=348, Percent_Identity=28.735632183908, Blast_Score=165, Evalue=1e-40, Organism=Homo sapiens, GI17505907, Length=381, Percent_Identity=30.4461942257218, Blast_Score=165, Evalue=2e-40, Organism=Homo sapiens, GI55749865, Length=360, Percent_Identity=29.1666666666667, Blast_Score=162, Evalue=1e-39, Organism=Homo sapiens, GI164419732, Length=346, Percent_Identity=32.9479768786127, Blast_Score=153, Evalue=6e-37, Organism=Homo sapiens, GI256223453, Length=346, Percent_Identity=28.3236994219653, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI8922886, Length=357, Percent_Identity=30.5322128851541, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI6005743, Length=357, Percent_Identity=30.2521008403361, Blast_Score=145, Evalue=2e-34, Organism=Homo sapiens, GI62241022, Length=347, Percent_Identity=30.835734870317, Blast_Score=143, Evalue=5e-34, Organism=Homo sapiens, GI62241024, Length=325, Percent_Identity=31.3846153846154, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=30.6709265175719, Blast_Score=138, Evalue=2e-32, Organism=Homo sapiens, GI38569505, Length=337, Percent_Identity=31.1572700296736, Blast_Score=132, Evalue=8e-31, Organism=Homo sapiens, GI38569503, Length=337, Percent_Identity=31.1572700296736, Blast_Score=131, Evalue=2e-30, Organism=Homo sapiens, GI256773275, Length=364, Percent_Identity=27.7472527472527, Blast_Score=127, Evalue=5e-29, Organism=Homo sapiens, GI20336298, Length=209, Percent_Identity=35.4066985645933, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI9506931, Length=386, Percent_Identity=26.1658031088083, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=28.1899109792285, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI154759257, Length=427, Percent_Identity=26.2295081967213, Blast_Score=110, Evalue=6e-24, Organism=Escherichia coli, GI87082221, Length=539, Percent_Identity=31.7254174397032, Blast_Score=237, Evalue=2e-63, Organism=Escherichia coli, GI1787605, Length=391, Percent_Identity=35.8056265984655, Blast_Score=214, Evalue=1e-56, Organism=Escherichia coli, GI1788930, Length=342, Percent_Identity=37.1345029239766, Blast_Score=189, Evalue=6e-49, Organism=Escherichia coli, GI1787016, Length=359, Percent_Identity=32.5905292479109, Blast_Score=188, Evalue=9e-49, Organism=Escherichia coli, GI1790214, Length=341, Percent_Identity=33.4310850439883, Blast_Score=181, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71987143, Length=343, Percent_Identity=35.5685131195335, Blast_Score=230, Evalue=2e-60, Organism=Caenorhabditis elegans, GI17555296, Length=344, Percent_Identity=34.8837209302326, Blast_Score=225, Evalue=6e-59, Organism=Caenorhabditis elegans, GI71995724, Length=347, Percent_Identity=33.7175792507205, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507121, Length=347, Percent_Identity=33.7175792507205, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71995514, Length=362, Percent_Identity=35.9116022099448, Blast_Score=206, Evalue=5e-53, Organism=Caenorhabditis elegans, GI17510307, Length=362, Percent_Identity=35.9116022099448, Blast_Score=205, Evalue=6e-53, Organism=Caenorhabditis elegans, GI17510309, Length=362, Percent_Identity=35.9116022099448, Blast_Score=205, Evalue=7e-53, Organism=Caenorhabditis elegans, GI32565321, Length=368, Percent_Identity=32.8804347826087, Blast_Score=195, Evalue=7e-50, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=33.4239130434783, Blast_Score=189, Evalue=3e-48, Organism=Caenorhabditis elegans, GI86570094, Length=375, Percent_Identity=31.4666666666667, Blast_Score=186, Evalue=5e-47, Organism=Caenorhabditis elegans, GI71999646, Length=345, Percent_Identity=30.1449275362319, Blast_Score=182, Evalue=6e-46, Organism=Caenorhabditis elegans, GI71999644, Length=345, Percent_Identity=30.1449275362319, Blast_Score=182, Evalue=7e-46, Organism=Caenorhabditis elegans, GI17507945, Length=346, Percent_Identity=31.2138728323699, Blast_Score=182, Evalue=7e-46, Organism=Caenorhabditis elegans, GI115533224, Length=369, Percent_Identity=33.3333333333333, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17552642, Length=343, Percent_Identity=31.7784256559767, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17537549, Length=366, Percent_Identity=31.4207650273224, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17507877, Length=359, Percent_Identity=33.1476323119777, Blast_Score=176, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17510559, Length=469, Percent_Identity=29.4243070362473, Blast_Score=176, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17552114, Length=347, Percent_Identity=28.5302593659942, Blast_Score=174, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17507879, Length=379, Percent_Identity=31.6622691292876, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17509811, Length=339, Percent_Identity=32.4483775811209, Blast_Score=172, Evalue=5e-43, Organism=Caenorhabditis elegans, GI17505370, Length=342, Percent_Identity=30.9941520467836, Blast_Score=172, Evalue=7e-43, Organism=Caenorhabditis elegans, GI115532548, Length=347, Percent_Identity=33.4293948126801, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI115532546, Length=347, Percent_Identity=33.4293948126801, Blast_Score=169, Evalue=4e-42, Organism=Caenorhabditis elegans, GI71982858, Length=344, Percent_Identity=29.3604651162791, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17507881, Length=367, Percent_Identity=31.3351498637602, Blast_Score=166, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17507641, Length=380, Percent_Identity=30.2631578947368, Blast_Score=161, Evalue=8e-40, Organism=Caenorhabditis elegans, GI193206561, Length=334, Percent_Identity=28.7425149700599, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI32564046, Length=371, Percent_Identity=30.4582210242588, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17536103, Length=381, Percent_Identity=29.6587926509186, Blast_Score=146, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17536101, Length=381, Percent_Identity=29.6587926509186, Blast_Score=145, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17536099, Length=381, Percent_Identity=29.6587926509186, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI193208216, Length=364, Percent_Identity=28.8461538461538, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI71990816, Length=382, Percent_Identity=29.0575916230367, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17553716, Length=327, Percent_Identity=27.82874617737, Blast_Score=132, Evalue=5e-31, Organism=Caenorhabditis elegans, GI17556951, Length=346, Percent_Identity=28.6127167630058, Blast_Score=132, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17508543, Length=351, Percent_Identity=29.3447293447293, Blast_Score=122, Evalue=7e-28, Organism=Caenorhabditis elegans, GI71997889, Length=411, Percent_Identity=25.3041362530414, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI25148203, Length=401, Percent_Identity=24.9376558603491, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI25148291, Length=332, Percent_Identity=25.6024096385542, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71982862, Length=203, Percent_Identity=32.0197044334975, Blast_Score=99, Evalue=9e-21, Organism=Caenorhabditis elegans, GI25148205, Length=337, Percent_Identity=24.6290801186944, Blast_Score=87, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71987152, Length=91, Percent_Identity=42.8571428571429, Blast_Score=81, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6321856, Length=350, Percent_Identity=37.7142857142857, Blast_Score=227, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6325138, Length=355, Percent_Identity=34.9295774647887, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6324778, Length=342, Percent_Identity=36.5497076023392, Blast_Score=207, Evalue=6e-54, Organism=Saccharomyces cerevisiae, GI6321360, Length=327, Percent_Identity=33.3333333333333, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6322912, Length=317, Percent_Identity=35.0157728706625, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6322323, Length=317, Percent_Identity=35.0157728706625, Blast_Score=187, Evalue=4e-48, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=33.6158192090396, Blast_Score=186, Evalue=8e-48, Organism=Saccharomyces cerevisiae, GI6321111, Length=358, Percent_Identity=33.5195530726257, Blast_Score=182, Evalue=2e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=364, Percent_Identity=32.967032967033, Blast_Score=180, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6323947, Length=349, Percent_Identity=34.0974212034384, Blast_Score=180, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6320041, Length=390, Percent_Identity=28.974358974359, Blast_Score=179, Evalue=9e-46, Organism=Saccharomyces cerevisiae, GI6323021, Length=345, Percent_Identity=32.463768115942, Blast_Score=179, Evalue=2e-45, Organism=Saccharomyces cerevisiae, GI6320224, Length=341, Percent_Identity=29.3255131964809, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6321963, Length=364, Percent_Identity=32.4175824175824, Blast_Score=174, Evalue=6e-44, Organism=Saccharomyces cerevisiae, GI6320449, Length=358, Percent_Identity=32.6815642458101, Blast_Score=172, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6320119, Length=350, Percent_Identity=30.5714285714286, Blast_Score=169, Evalue=1e-42, Organism=Saccharomyces cerevisiae, GI6320400, Length=370, Percent_Identity=29.1891891891892, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=29.2565947242206, Blast_Score=160, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6324620, Length=358, Percent_Identity=29.608938547486, Blast_Score=151, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6319714, Length=358, Percent_Identity=23.7430167597765, Blast_Score=136, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321267, Length=337, Percent_Identity=29.9703264094956, Blast_Score=130, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6322876, Length=426, Percent_Identity=26.9953051643192, Blast_Score=129, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6320173, Length=235, Percent_Identity=29.3617021276596, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6323306, Length=409, Percent_Identity=25.1833740831296, Blast_Score=103, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6324366, Length=399, Percent_Identity=24.0601503759398, Blast_Score=90, Evalue=1e-18, Organism=Drosophila melanogaster, GI24584399, Length=334, Percent_Identity=34.4311377245509, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI21355075, Length=358, Percent_Identity=35.195530726257, Blast_Score=206, Evalue=6e-53, Organism=Drosophila melanogaster, GI24645031, Length=342, Percent_Identity=33.0409356725146, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI24585582, Length=466, Percent_Identity=28.755364806867, Blast_Score=205, Evalue=1e-52, Organism=Drosophila melanogaster, GI17985987, Length=362, Percent_Identity=33.4254143646409, Blast_Score=196, Evalue=4e-50, Organism=Drosophila melanogaster, GI17136814, Length=348, Percent_Identity=35.632183908046, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI28574962, Length=359, Percent_Identity=32.5905292479109, Blast_Score=194, Evalue=2e-49, Organism=Drosophila melanogaster, GI24582080, Length=316, Percent_Identity=32.9113924050633, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI24582078, Length=316, Percent_Identity=32.9113924050633, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI17136248, Length=316, Percent_Identity=32.9113924050633, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI24582075, Length=316, Percent_Identity=32.9113924050633, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI24584994, Length=372, Percent_Identity=31.989247311828, Blast_Score=188, Evalue=1e-47, Organism=Drosophila melanogaster, GI24662330, Length=357, Percent_Identity=29.9719887955182, Blast_Score=187, Evalue=2e-47, Organism=Drosophila melanogaster, GI24644479, Length=358, Percent_Identity=32.122905027933, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24644483, Length=358, Percent_Identity=32.122905027933, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI281361218, Length=358, Percent_Identity=32.122905027933, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24644481, Length=358, Percent_Identity=32.122905027933, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI24644487, Length=358, Percent_Identity=32.122905027933, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI45551833, Length=358, Percent_Identity=32.122905027933, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24644485, Length=358, Percent_Identity=32.122905027933, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24642151, Length=353, Percent_Identity=31.1614730878187, Blast_Score=182, Evalue=6e-46, Organism=Drosophila melanogaster, GI18857967, Length=378, Percent_Identity=30.6878306878307, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17977678, Length=346, Percent_Identity=32.0809248554913, Blast_Score=177, Evalue=3e-44, Organism=Drosophila melanogaster, GI21356161, Length=360, Percent_Identity=31.6666666666667, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI28575014, Length=343, Percent_Identity=32.0699708454811, Blast_Score=173, Evalue=4e-43, Organism=Drosophila melanogaster, GI28571808, Length=350, Percent_Identity=31.4285714285714, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI28571809, Length=350, Percent_Identity=31.4285714285714, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI24581954, Length=344, Percent_Identity=30.8139534883721, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24581952, Length=344, Percent_Identity=30.8139534883721, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI24581956, Length=344, Percent_Identity=30.8139534883721, Blast_Score=166, Evalue=4e-41, Organism=Drosophila melanogaster, GI18859659, Length=409, Percent_Identity=29.8288508557457, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI28571338, Length=409, Percent_Identity=29.8288508557457, Blast_Score=163, Evalue=3e-40, Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=32.6797385620915, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI24583281, Length=348, Percent_Identity=26.4367816091954, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI24583279, Length=348, Percent_Identity=26.4367816091954, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI17647335, Length=411, Percent_Identity=28.7104622871046, Blast_Score=155, Evalue=6e-38, Organism=Drosophila melanogaster, GI21355559, Length=360, Percent_Identity=33.6111111111111, Blast_Score=148, Evalue=1e-35, Organism=Drosophila melanogaster, GI20130173, Length=437, Percent_Identity=27.0022883295195, Blast_Score=146, Evalue=6e-35, Organism=Drosophila melanogaster, GI24642822, Length=359, Percent_Identity=28.4122562674095, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24666101, Length=345, Percent_Identity=31.0144927536232, Blast_Score=141, Evalue=1e-33, Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=27.82874617737, Blast_Score=122, Evalue=9e-28, Organism=Drosophila melanogaster, GI24643725, Length=367, Percent_Identity=23.9782016348774, Blast_Score=105, Evalue=9e-23, Organism=Drosophila melanogaster, GI19920478, Length=354, Percent_Identity=25.1412429378531, Blast_Score=104, Evalue=2e-22, Organism=Drosophila melanogaster, GI17136666, Length=223, Percent_Identity=31.390134529148, Blast_Score=76, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005580 - InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 71661; Mature: 71530
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEFNGVVPAIAKALQKRGYAELTPVQKAMLDPALAASDALVSAQTGSGKTVAFGLALAP CCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHCCCEEEECCCCCCEEEEHHHHHH TLLEGGERFGNAGAPLALVIAPTRELALQVKRELEWLYEMTGAVIASCVGGMDIRSERRS HHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LERGAHIVVGTPGRLCDHIRRRALDMSELKAAVLDEADEMLDLGFREDLEFILDSAPDER HHCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCH RTLMFSATVPAAIAKLAKSYQRNAVRISTAAEAKQHVDIEYRALMVAPSDRENAIINVLR HEEEEECHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHH YYEATNAIVFCSTRAAVNHLTARFNNRNFSVVALSGELTQNERTHALQAMRDGRARVCIA HHHHCCEEEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEE TDVAARGIDLPGLDLVIHADLPTNPDTLLHRSGRTGRAGRKGISAMIVPLNARRKAERLL ECHHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH ENAGISAAWARPPSAEEVNERDDERLLADPIFSEAPQEEEQGLVQQLLSSHGAEKLAAAF HHCCCCEEECCCCCHHHHCCCCCHHHHHCHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH LRLYRTNHSAPEDLLEVTVQDGGSRKRRDNAEPFEPAQRGPREDFGASVWFSVSVGRKQN HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHCCCEEEEEEEECCCCC AEPRWLIPMLCRNGNVTKREIGAIKMQPEETFVEIAAASAESFLAAIGPNKALERGIRVT CCCCEEHHHHHCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEE KLSGTPDFSRAPSPKPYAGKPSRDERPGDTFREERRNNKFGKAPGGGYAAADNSGQQRQD EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHH SWSKKPGKPGFDGPKFDKPKYDKPKFEGGKSEGAKSERPKFEGKGGAGAKGKFSKKKPG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEFNGVVPAIAKALQKRGYAELTPVQKAMLDPALAASDALVSAQTGSGKTVAFGLALAP CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHCCCEEEECCCCCCEEEEHHHHHH TLLEGGERFGNAGAPLALVIAPTRELALQVKRELEWLYEMTGAVIASCVGGMDIRSERRS HHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH LERGAHIVVGTPGRLCDHIRRRALDMSELKAAVLDEADEMLDLGFREDLEFILDSAPDER HHCCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCH RTLMFSATVPAAIAKLAKSYQRNAVRISTAAEAKQHVDIEYRALMVAPSDRENAIINVLR HEEEEECHHHHHHHHHHHHHHCCCEEEEHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHH YYEATNAIVFCSTRAAVNHLTARFNNRNFSVVALSGELTQNERTHALQAMRDGRARVCIA HHHHCCEEEEEECHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEE TDVAARGIDLPGLDLVIHADLPTNPDTLLHRSGRTGRAGRKGISAMIVPLNARRKAERLL ECHHHCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHH ENAGISAAWARPPSAEEVNERDDERLLADPIFSEAPQEEEQGLVQQLLSSHGAEKLAAAF HHCCCCEEECCCCCHHHHCCCCCHHHHHCHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH LRLYRTNHSAPEDLLEVTVQDGGSRKRRDNAEPFEPAQRGPREDFGASVWFSVSVGRKQN HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCHHCCCEEEEEEEECCCCC AEPRWLIPMLCRNGNVTKREIGAIKMQPEETFVEIAAASAESFLAAIGPNKALERGIRVT CCCCEEHHHHHCCCCCCHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCEEE KLSGTPDFSRAPSPKPYAGKPSRDERPGDTFREERRNNKFGKAPGGGYAAADNSGQQRQD EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEECCCCCCCHHHH SWSKKPGKPGFDGPKFDKPKYDKPKFEGGKSEGAKSERPKFEGKGGAGAKGKFSKKKPG HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12522265 [H]