| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ykvO [H]
Identifier: 209549378
GI number: 209549378
Start: 1826901
End: 1827644
Strand: Reverse
Name: ykvO [H]
Synonym: Rleg2_1783
Alternate gene names: 209549378
Gene position: 1827644-1826901 (Counterclockwise)
Preceding gene: 209549380
Following gene: 209549377
Centisome position: 40.27
GC content: 63.04
Gene sequence:
>744_bases ATGTTTCAGGGAAAGACGGCGTTGATCACCGGCGGCTCGAGCGGGATCGGTCTCGCGGCTGCGAGGCAATTGCGCGATGG CGGTGCACGGGTGGCCATTACCGGCCGATCGCAGGAGAAGCTCGACAACGCCCGGGATGATTTGGGCGGCGGTGTCGTTG CGATCCGTGCCGACATGTCCTCGCTTGATGATCTGAAGCGCATGCGAGAAGAGCTTCAACATGCGTTCGGGTCGCTGGAC ATTCTTTTCGCAAATGCCGGCGTGGCGCTCGGTACACCGCTCGCAACCACGGAGGAAGAGACCTACGACAAGATCATGGA TGCGAACGTGAAAGGCGCCTTCTTCACGGTGCAGGCTGTCCTGCCGCTGATGCGCGAGGGCGGCTCGATCATTCTGAACA CCTCCTGGCTGAATCAGGTCGGCACGCCGGGACGGGCGGTCCTTTCCGCTTCCAAGGCGGCCGTTCGCTCCTTCGCGCGG ACGATGTCGGCCGAACTGATCGACCGCAAGATCCGGGTGAATGCCGTCAGCCCCGGCTCGATCGAGACACCTATTCACCG CGGAAAAAACCAGACCGAGGAAGAGTTTCGCGCCTATGCGGAGCGGGTCGGCGCACAGGTGCCGATCGGGCGCATGGGCA GGCCGGAGGAGATCGCAGCCGCCGTTTGCTTCCTTGCCAGCGACGCGTCGAGCTATATGCTCGGTGCGGAGATCGTCGTC GACGGCGGCAGATCGGAGCTTTGA
Upstream 100 bases:
>100_bases ACTCACGACAAAGATTTTCTTTCTTTGCGGTATGCCCGGTTTTCCTCGCCAATGCAATCTTGCGCGCTACCCTGGAGGCA AGACAAAGAGGTTTGCGAAG
Downstream 100 bases:
>100_bases CCATGTTGCTCAACGACGACCTCTCCGAGCGCGCCCTCGTGCATGCCGGCCGGCTCGAATGGATGCCGAGCCCCACGAAA GGCGTGGATCGGCGGATGCT
Product: short-chain dehydrogenase/reductase SDR
Products: (3R)-hydroxyacyl-[acyl-carrier-protein]; NADP; NADPH; Proton; beta-ketoacyl-ACP [C]
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MFQGKTALITGGSSGIGLAAARQLRDGGARVAITGRSQEKLDNARDDLGGGVVAIRADMSSLDDLKRMREELQHAFGSLD ILFANAGVALGTPLATTEEETYDKIMDANVKGAFFTVQAVLPLMREGGSIILNTSWLNQVGTPGRAVLSASKAAVRSFAR TMSAELIDRKIRVNAVSPGSIETPIHRGKNQTEEEFRAYAERVGAQVPIGRMGRPEEIAAAVCFLASDASSYMLGAEIVV DGGRSEL
Sequences:
>Translated_247_residues MFQGKTALITGGSSGIGLAAARQLRDGGARVAITGRSQEKLDNARDDLGGGVVAIRADMSSLDDLKRMREELQHAFGSLD ILFANAGVALGTPLATTEEETYDKIMDANVKGAFFTVQAVLPLMREGGSIILNTSWLNQVGTPGRAVLSASKAAVRSFAR TMSAELIDRKIRVNAVSPGSIETPIHRGKNQTEEEFRAYAERVGAQVPIGRMGRPEEIAAAVCFLASDASSYMLGAEIVV DGGRSEL >Mature_247_residues MFQGKTALITGGSSGIGLAAARQLRDGGARVAITGRSQEKLDNARDDLGGGVVAIRADMSSLDDLKRMREELQHAFGSLD ILFANAGVALGTPLATTEEETYDKIMDANVKGAFFTVQAVLPLMREGGSIILNTSWLNQVGTPGRAVLSASKAAVRSFAR TMSAELIDRKIRVNAVSPGSIETPIHRGKNQTEEEFRAYAERVGAQVPIGRMGRPEEIAAAVCFLASDASSYMLGAEIVV DGGRSEL
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=34.9593495934959, Blast_Score=127, Evalue=9e-30, Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=28.515625, Blast_Score=124, Evalue=6e-29, Organism=Homo sapiens, GI40254992, Length=241, Percent_Identity=34.0248962655602, Blast_Score=121, Evalue=7e-28, Organism=Homo sapiens, GI5031737, Length=253, Percent_Identity=32.4110671936759, Blast_Score=114, Evalue=1e-25, Organism=Homo sapiens, GI15277342, Length=251, Percent_Identity=32.2709163346614, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=31.0756972111554, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI66933014, Length=187, Percent_Identity=32.620320855615, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI59889578, Length=227, Percent_Identity=30.3964757709251, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI33667109, Length=189, Percent_Identity=33.8624338624339, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI157739938, Length=193, Percent_Identity=32.1243523316062, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI7705925, Length=246, Percent_Identity=28.4552845528455, Blast_Score=91, Evalue=7e-19, Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=29.6, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=33.5164835164835, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4503817, Length=230, Percent_Identity=26.5217391304348, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI4503301, Length=254, Percent_Identity=29.9212598425197, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI20149619, Length=187, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI4758504, Length=255, Percent_Identity=27.4509803921569, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI7657478, Length=188, Percent_Identity=31.3829787234043, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI31542939, Length=239, Percent_Identity=27.1966527196653, Blast_Score=68, Evalue=8e-12, Organism=Homo sapiens, GI40807363, Length=194, Percent_Identity=28.3505154639175, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1787335, Length=246, Percent_Identity=34.9593495934959, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI87082100, Length=257, Percent_Identity=33.852140077821, Blast_Score=114, Evalue=5e-27, Organism=Escherichia coli, GI1789378, Length=239, Percent_Identity=32.6359832635983, Blast_Score=114, Evalue=9e-27, Organism=Escherichia coli, GI1788459, Length=246, Percent_Identity=32.520325203252, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=29.7959183673469, Blast_Score=104, Evalue=5e-24, Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=32.421875, Blast_Score=102, Evalue=3e-23, Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=31.3253012048193, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI2367175, Length=251, Percent_Identity=30.6772908366534, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=29.6, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=31.1740890688259, Blast_Score=91, Evalue=6e-20, Organism=Escherichia coli, GI1787820, Length=226, Percent_Identity=29.646017699115, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=29.5081967213115, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786701, Length=194, Percent_Identity=30.9278350515464, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1788891, Length=231, Percent_Identity=26.8398268398268, Blast_Score=65, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=33.8582677165354, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=34.9624060150376, Blast_Score=129, Evalue=2e-30, Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=32.5301204819277, Blast_Score=123, Evalue=8e-29, Organism=Caenorhabditis elegans, GI17538480, Length=264, Percent_Identity=32.5757575757576, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI193204405, Length=263, Percent_Identity=35.7414448669202, Blast_Score=120, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17559104, Length=260, Percent_Identity=33.0769230769231, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=32.8063241106719, Blast_Score=118, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=34.0996168582375, Blast_Score=117, Evalue=4e-27, Organism=Caenorhabditis elegans, GI71994600, Length=250, Percent_Identity=31.2, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI17562906, Length=261, Percent_Identity=33.3333333333333, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17562904, Length=260, Percent_Identity=32.6923076923077, Blast_Score=116, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=33.4600760456274, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=32.5757575757576, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17562990, Length=258, Percent_Identity=33.3333333333333, Blast_Score=114, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=32.3076923076923, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI17551412, Length=263, Percent_Identity=31.1787072243346, Blast_Score=112, Evalue=2e-25, Organism=Caenorhabditis elegans, GI17560220, Length=267, Percent_Identity=34.4569288389513, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=31.5789473684211, Blast_Score=110, Evalue=7e-25, Organism=Caenorhabditis elegans, GI72000259, Length=263, Percent_Identity=32.6996197718631, Blast_Score=107, Evalue=5e-24, Organism=Caenorhabditis elegans, GI17560676, Length=257, Percent_Identity=30.3501945525292, Blast_Score=103, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=31.8181818181818, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17544670, Length=261, Percent_Identity=27.5862068965517, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17563726, Length=260, Percent_Identity=32.6923076923077, Blast_Score=101, Evalue=3e-22, Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=29.5019157088123, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17536651, Length=257, Percent_Identity=31.5175097276265, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17536025, Length=260, Percent_Identity=31.9230769230769, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17538182, Length=255, Percent_Identity=27.843137254902, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17561272, Length=231, Percent_Identity=29.004329004329, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=27.8350515463918, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17508651, Length=249, Percent_Identity=27.710843373494, Blast_Score=78, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17567345, Length=191, Percent_Identity=30.3664921465969, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI115534694, Length=251, Percent_Identity=27.8884462151394, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI193203115, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI193203117, Length=192, Percent_Identity=28.125, Blast_Score=70, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17508895, Length=187, Percent_Identity=25.1336898395722, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI212645366, Length=107, Percent_Identity=37.3831775700935, Blast_Score=64, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=27.4509803921569, Blast_Score=106, Evalue=4e-24, Organism=Saccharomyces cerevisiae, GI6323882, Length=190, Percent_Identity=32.6315789473684, Blast_Score=85, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322861, Length=190, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6322227, Length=200, Percent_Identity=24.5, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI28571526, Length=251, Percent_Identity=33.8645418326693, Blast_Score=139, Evalue=1e-33, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=33.7301587301587, Blast_Score=134, Evalue=6e-32, Organism=Drosophila melanogaster, GI21357041, Length=252, Percent_Identity=33.3333333333333, Blast_Score=130, Evalue=9e-31, Organism=Drosophila melanogaster, GI23397609, Length=248, Percent_Identity=32.6612903225806, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI21355319, Length=247, Percent_Identity=33.1983805668016, Blast_Score=124, Evalue=8e-29, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=34.4, Blast_Score=113, Evalue=9e-26, Organism=Drosophila melanogaster, GI24643142, Length=242, Percent_Identity=32.6446280991736, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI24644337, Length=248, Percent_Identity=33.4677419354839, Blast_Score=110, Evalue=7e-25, Organism=Drosophila melanogaster, GI21358495, Length=189, Percent_Identity=31.2169312169312, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI281364494, Length=200, Percent_Identity=29, Blast_Score=77, Evalue=8e-15, Organism=Drosophila melanogaster, GI17737361, Length=258, Percent_Identity=26.7441860465116, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI18859837, Length=191, Percent_Identity=29.3193717277487, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007236, Length=198, Percent_Identity=26.7676767676768, Blast_Score=71, Evalue=5e-13, Organism=Drosophila melanogaster, GI45553409, Length=205, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24647948, Length=205, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24647946, Length=205, Percent_Identity=26.8292682926829, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI21356301, Length=193, Percent_Identity=26.9430051813472, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI281364892, Length=169, Percent_Identity=29.585798816568, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI28571387, Length=199, Percent_Identity=27.6381909547739, Blast_Score=64, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.1.1.100 [C]
Molecular weight: Translated: 26169; Mature: 26169
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQGKTALITGGSSGIGLAAARQLRDGGARVAITGRSQEKLDNARDDLGGGVVAIRADMS CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCHH SLDDLKRMREELQHAFGSLDILFANAGVALGTPLATTEEETYDKIMDANVKGAFFTVQAV HHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHH LPLMREGGSIILNTSWLNQVGTPGRAVLSASKAAVRSFARTMSAELIDRKIRVNAVSPGS HHHHHCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCC IETPIHRGKNQTEEEFRAYAERVGAQVPIGRMGRPEEIAAAVCFLASDASSYMLGAEIVV CCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEE DGGRSEL ECCCCCC >Mature Secondary Structure MFQGKTALITGGSSGIGLAAARQLRDGGARVAITGRSQEKLDNARDDLGGGVVAIRADMS CCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCEEEEECCHH SLDDLKRMREELQHAFGSLDILFANAGVALGTPLATTEEETYDKIMDANVKGAFFTVQAV HHHHHHHHHHHHHHHHCCEEEEEECCCEEECCCCCCCCHHHHHHHHCCCCCCHHHHHHHH LPLMREGGSIILNTSWLNQVGTPGRAVLSASKAAVRSFARTMSAELIDRKIRVNAVSPGS HHHHHCCCCEEEEEHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCC IETPIHRGKNQTEEEFRAYAERVGAQVPIGRMGRPEEIAAAVCFLASDASSYMLGAEIVV CCCCHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEE DGGRSEL ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Oxoacyl-[acyl-carrier-protein]; NADPH; D-3-hydroxy-acyl-ACP; NADP [C]
Specific reaction: Oxoacyl-[acyl-carrier-protein] + NADPH = (3R)-hydroxyacyl-[acyl-carrier-protein] + NADP+ D-3-hydroxy-acyl-ACP + NADP = NADPH + Proton + beta-ketoacyl-ACP [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]