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The map label for this gene is ychE [C]

Identifier: 209549339

GI number: 209549339

Start: 1785402

End: 1786049

Strand: Reverse

Name: ychE [C]

Synonym: Rleg2_1743

Alternate gene names: 209549339

Gene position: 1786049-1785402 (Counterclockwise)

Preceding gene: 209549341

Following gene: 209549337

Centisome position: 39.36

GC content: 65.12

Gene sequence:

>648_bases
ATGGCAAGCGCCGACCAATTGATCAACGCCTTCACGACGCTCATCGTCACCATCGATCCGCCGGGGCTCGCGCCGATCTT
CCTGGGGCTGACGACCGGCATGAGCCGCGCCCAGCGCACCCAGGTGGCGCTGCGCGGCTCGACCATCGCCTTCATCATCC
TTGCCGTCTTCGCCCTGTTCGGCGCGAGCGTACTCGGCGTGCTCGGGATCTCGATTGGCGCCTTCCGCATCGCCGGCGGA
TTGCTGCTCTTCTGGATCGCCTTCGAGATGGTGTTCGAGCGGCGGCAGGAGCGCAAGGAGAAGGCCACCGAGGCGGCTGT
CACCAAGGATCATATCGAGAATATCGCCGTCTTTCCCCTCGCCTTGCCACTGATTGCCGGCCCGGGCGCGATCTCGGCGA
CGATCCTGCTTGCCGGCACGCTGCCGACATCCGTCGAAAAAGCCCAGTTCATCGCCGTCATCGCCGCCAATCTGTTGCTG
ACCTTTCTCATGCTGCTGATCGCCGACAGGCTAGACCGCTTCCTCGGCGTCACCGGCCGGGCGATCCTGACACGGCTCCT
CGGCGTCATCCTCGCCGCCCTTGCGGTGCAATTCGTCGTCGACGGCGCGAAAGCGGCGCTCAATCTGATCAGCGCGACGC
CGCACTGA

Upstream 100 bases:

>100_bases
GCGGGCCGCCGCGGGATATTTGCCAAATCGGAATCGCCGCTTCACAATCACAAAAACCACGCATAAAAACCACGCGACTA
TATGGGGTTTTCGAGGGACG

Downstream 100 bases:

>100_bases
TTGGTGCGAAACCAAAGAAAAAGAGCATGACGCCATCAAAGGCATCATGCTCTCGGATAGTCTATAGATCCAGGAAAAGC
GGTCGATCAGAACGGGATGT

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MASADQLINAFTTLIVTIDPPGLAPIFLGLTTGMSRAQRTQVALRGSTIAFIILAVFALFGASVLGVLGISIGAFRIAGG
LLLFWIAFEMVFERRQERKEKATEAAVTKDHIENIAVFPLALPLIAGPGAISATILLAGTLPTSVEKAQFIAVIAANLLL
TFLMLLIADRLDRFLGVTGRAILTRLLGVILAALAVQFVVDGAKAALNLISATPH

Sequences:

>Translated_215_residues
MASADQLINAFTTLIVTIDPPGLAPIFLGLTTGMSRAQRTQVALRGSTIAFIILAVFALFGASVLGVLGISIGAFRIAGG
LLLFWIAFEMVFERRQERKEKATEAAVTKDHIENIAVFPLALPLIAGPGAISATILLAGTLPTSVEKAQFIAVIAANLLL
TFLMLLIADRLDRFLGVTGRAILTRLLGVILAALAVQFVVDGAKAALNLISATPH
>Mature_214_residues
ASADQLINAFTTLIVTIDPPGLAPIFLGLTTGMSRAQRTQVALRGSTIAFIILAVFALFGASVLGVLGISIGAFRIAGGL
LLFWIAFEMVFERRQERKEKATEAAVTKDHIENIAVFPLALPLIAGPGAISATILLAGTLPTSVEKAQFIAVIAANLLLT
FLMLLIADRLDRFLGVTGRAILTRLLGVILAALAVQFVVDGAKAALNLISATPH

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=195, Percent_Identity=36.4102564102564, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1787809, Length=188, Percent_Identity=33.5106382978723, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1789842, Length=204, Percent_Identity=31.3725490196078, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22615; Mature: 22484

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASADQLINAFTTLIVTIDPPGLAPIFLGLTTGMSRAQRTQVALRGSTIAFIILAVFALF
CCCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GASVLGVLGISIGAFRIAGGLLLFWIAFEMVFERRQERKEKATEAAVTKDHIENIAVFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPLIAGPGAISATILLAGTLPTSVEKAQFIAVIAANLLLTFLMLLIADRLDRFLGVTGR
HHHHHCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AILTRLLGVILAALAVQFVVDGAKAALNLISATPH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASADQLINAFTTLIVTIDPPGLAPIFLGLTTGMSRAQRTQVALRGSTIAFIILAVFALF
CCHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GASVLGVLGISIGAFRIAGGLLLFWIAFEMVFERRQERKEKATEAAVTKDHIENIAVFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPLIAGPGAISATILLAGTLPTSVEKAQFIAVIAANLLLTFLMLLIADRLDRFLGVTGR
HHHHHCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AILTRLLGVILAALAVQFVVDGAKAALNLISATPH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]