Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
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Accession | NC_011369 |
Length | 4,537,948 |
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The map label for this gene is yejA [C]
Identifier: 209549329
GI number: 209549329
Start: 1772990
End: 1774792
Strand: Reverse
Name: yejA [C]
Synonym: Rleg2_1733
Alternate gene names: 209549329
Gene position: 1774792-1772990 (Counterclockwise)
Preceding gene: 209549331
Following gene: 209549328
Centisome position: 39.11
GC content: 60.01
Gene sequence:
>1803_bases ATGCTCCGGATCGTCGTCCCCCTCGTCCTCTCGCTGCTGTGCGGCGCTGTTGCCGCCGAGCCGCTGCATGGCATCGCGAT GCATGGCGAGCCTGGCTTGCCGGCCGATTACAAACACTTCCCTTACGTCAATCCCGACGTGAAGAAGGGCGGCAAGATCA CCTATGGAGTCGTCGGCACCTTCGACAGCCTCAACCCGTTCATTCTGAAAAGCATGCGCACGACGGCGCGCGGCATGTGG GATCCGGAATATGGCAATCTCGTCTACGAATCGCTGATGCAGCGCTCCAGGGACGAGCCCTTCACGCTCTACGGCCTTCT TGCCGAGACGGTGGAATGGGACGACGCCCGGAGCTTCATCCAGTTCAACCTCAATCCGAAGGCGAAATGGGCAGATGGCC AGCCGGTGACGCCCGAGGATGTGATGTTCACCTTCGAGCTGATGCGCGACAAGGGGCGCGTGCCCTTCGCCAACCGCCTC AACGTCGTCGCCAAGATGGAAAAGGTCGGCGAAAACAGCGTGCGCTTCACCTTCAACGACAAGGCCGACCGCGAGACTCC TTTGATTTTCGGTCTTTTCCCGGTCCTGCCGAAACACGCGATCGATCCGGAAACCTTCGACCGCTCGTCGCTGACACCGC CTGTGGGATCCGGTCCCTACAAGGTGAAGACGGTGAAGCCCGGCGAGAGCATCACCTATGAGCGCGATCCCAATTACTGG GGCAAGGACATTCCCTCCAAGGTCGGCACCGACAATTACGATCAGATCACCGTCCAGTATTTCCTGCAGGACACGACGCT GTTCGAGGCCTTCAAGAAGGGCGATGTCGACGTCTATCCCGACGGCAATCCCGGCCACTGGGCCAATGCCTATAATTTCC CCGCGGTCACCTCAGGCGCCGTCGTCAAGGACGTATTCACACCAAAACTGCCGAGCGGCATGCTCGGCTTCGTGTTCAAC ACGCGCCGGCCGATCTTTGCCGACACCAAGGTGCGCGAAGGCCTGTCGTTGGTGTTCGATTTCGAATGGGCAAACAAGAA CCTTTATTCCGGCGCCTATAAGCGCACCCAGAGCTTCTGGCAGAATTCGGAGTTGTCCAGTTTCGGCGTTCCCGCCAATG CGGCCGAACTTGCGTTGCTCGGACCGATCAAGGACAAAATCGCACCCGCGATTCTCGACGGCACCTACAAGCTTCCGGTC ACTGACGGCTCCGGCCGCGACCGCGATGTGCTGAAGCAGGCCGTTGGACTGTTGAAACAGGGCGGCTATACGATCCAGGG CGGCAAGATGCTGGATGCCTCCGGCCGCCAGCTCGCCTTCGAGATCATGACGCAGAACGCCGATCAGGAGAAACTCGCCA TTGCCTATCAGCGTTCGCTGCAGACAATCGGCATCGCCGCTTCGATCCGCACCGTCGACGATTCGCAGTATCAGAGCCGG ACGAATAGCTTCGACTACGACATGATCATGAAGTCTTACACCTCGTCGCTGTCGCCCGGAAACGAACAGCTCGGCCGCTG GTCGTCGGCTGCGCGCACGCGCGAGGGTACGGACAGTTTTGCCGGCGCCAATGATCCCGATATCGACACGCTGATCGATC ATCTGCTGAGGGCACGCTCGGCTGAGGATTTCACCGCGGCGGTGCGCTCCTACGATCGGCTGCTGCTTTCCGGCCATTAC GTGCTGCCGCTCTATCATATCGACCAGCAATGGGTGGCTCACAGCAAACGCATCGGCGGTCCCGACAGCGTACCGCTCAA TGGCTATCAACTACCGGTCTGGTGGGATACGAGCGTGCAGTAG
Upstream 100 bases:
>100_bases GCGATGCCAAAGAAATCGCCGCTTCGTGTTGGAATCGCTCGACCCCATGATAATCTCCGCGGTGAATCATGCCCGTTTTC GTGGTTGTAAGGATTGCCGA
Downstream 100 bases:
>100_bases AAGCAGCCGAACCGCGCGGCCTTTATGTCTCCCTTGGGAGACTCATAGACATAAGGAAGATCATCATGGAGCGTATCACC ATCGACGTCGTCTCGGATGT
Product: family 5 extracellular solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MLRIVVPLVLSLLCGAVAAEPLHGIAMHGEPGLPADYKHFPYVNPDVKKGGKITYGVVGTFDSLNPFILKSMRTTARGMW DPEYGNLVYESLMQRSRDEPFTLYGLLAETVEWDDARSFIQFNLNPKAKWADGQPVTPEDVMFTFELMRDKGRVPFANRL NVVAKMEKVGENSVRFTFNDKADRETPLIFGLFPVLPKHAIDPETFDRSSLTPPVGSGPYKVKTVKPGESITYERDPNYW GKDIPSKVGTDNYDQITVQYFLQDTTLFEAFKKGDVDVYPDGNPGHWANAYNFPAVTSGAVVKDVFTPKLPSGMLGFVFN TRRPIFADTKVREGLSLVFDFEWANKNLYSGAYKRTQSFWQNSELSSFGVPANAAELALLGPIKDKIAPAILDGTYKLPV TDGSGRDRDVLKQAVGLLKQGGYTIQGGKMLDASGRQLAFEIMTQNADQEKLAIAYQRSLQTIGIAASIRTVDDSQYQSR TNSFDYDMIMKSYTSSLSPGNEQLGRWSSAARTREGTDSFAGANDPDIDTLIDHLLRARSAEDFTAAVRSYDRLLLSGHY VLPLYHIDQQWVAHSKRIGGPDSVPLNGYQLPVWWDTSVQ
Sequences:
>Translated_600_residues MLRIVVPLVLSLLCGAVAAEPLHGIAMHGEPGLPADYKHFPYVNPDVKKGGKITYGVVGTFDSLNPFILKSMRTTARGMW DPEYGNLVYESLMQRSRDEPFTLYGLLAETVEWDDARSFIQFNLNPKAKWADGQPVTPEDVMFTFELMRDKGRVPFANRL NVVAKMEKVGENSVRFTFNDKADRETPLIFGLFPVLPKHAIDPETFDRSSLTPPVGSGPYKVKTVKPGESITYERDPNYW GKDIPSKVGTDNYDQITVQYFLQDTTLFEAFKKGDVDVYPDGNPGHWANAYNFPAVTSGAVVKDVFTPKLPSGMLGFVFN TRRPIFADTKVREGLSLVFDFEWANKNLYSGAYKRTQSFWQNSELSSFGVPANAAELALLGPIKDKIAPAILDGTYKLPV TDGSGRDRDVLKQAVGLLKQGGYTIQGGKMLDASGRQLAFEIMTQNADQEKLAIAYQRSLQTIGIAASIRTVDDSQYQSR TNSFDYDMIMKSYTSSLSPGNEQLGRWSSAARTREGTDSFAGANDPDIDTLIDHLLRARSAEDFTAAVRSYDRLLLSGHY VLPLYHIDQQWVAHSKRIGGPDSVPLNGYQLPVWWDTSVQ >Mature_600_residues MLRIVVPLVLSLLCGAVAAEPLHGIAMHGEPGLPADYKHFPYVNPDVKKGGKITYGVVGTFDSLNPFILKSMRTTARGMW DPEYGNLVYESLMQRSRDEPFTLYGLLAETVEWDDARSFIQFNLNPKAKWADGQPVTPEDVMFTFELMRDKGRVPFANRL NVVAKMEKVGENSVRFTFNDKADRETPLIFGLFPVLPKHAIDPETFDRSSLTPPVGSGPYKVKTVKPGESITYERDPNYW GKDIPSKVGTDNYDQITVQYFLQDTTLFEAFKKGDVDVYPDGNPGHWANAYNFPAVTSGAVVKDVFTPKLPSGMLGFVFN TRRPIFADTKVREGLSLVFDFEWANKNLYSGAYKRTQSFWQNSELSSFGVPANAAELALLGPIKDKIAPAILDGTYKLPV TDGSGRDRDVLKQAVGLLKQGGYTIQGGKMLDASGRQLAFEIMTQNADQEKLAIAYQRSLQTIGIAASIRTVDDSQYQSR TNSFDYDMIMKSYTSSLSPGNEQLGRWSSAARTREGTDSFAGANDPDIDTLIDHLLRARSAEDFTAAVRSYDRLLLSGHY VLPLYHIDQQWVAHSKRIGGPDSVPLNGYQLPVWWDTSVQ
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=600, Percent_Identity=32.1666666666667, Blast_Score=329, Evalue=4e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 66820; Mature: 66820
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00210 HEMOCYANIN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIVVPLVLSLLCGAVAAEPLHGIAMHGEPGLPADYKHFPYVNPDVKKGGKITYGVVGT CEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC FDSLNPFILKSMRTTARGMWDPEYGNLVYESLMQRSRDEPFTLYGLLAETVEWDDARSFI CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCEEE QFNLNPKAKWADGQPVTPEDVMFTFELMRDKGRVPFANRLNVVAKMEKVGENSVRFTFND EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC KADRETPLIFGLFPVLPKHAIDPETFDRSSLTPPVGSGPYKVKTVKPGESITYERDPNYW CCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCC GKDIPSKVGTDNYDQITVQYFLQDTTLFEAFKKGDVDVYPDGNPGHWANAYNFPAVTSGA CCCCCHHCCCCCCCEEEEEEEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCC VVKDVFTPKLPSGMLGFVFNTRRPIFADTKVREGLSLVFDFEWANKNLYSGAYKRTQSFW HHHHHCCCCCCCCCEEEEEECCCCCEECCHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH QNSELSSFGVPANAAELALLGPIKDKIAPAILDGTYKLPVTDGSGRDRDVLKQAVGLLKQ CCCCCCCCCCCCCCCCEEEECCHHHHHCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHC GGYTIQGGKMLDASGRQLAFEIMTQNADQEKLAIAYQRSLQTIGIAASIRTVDDSQYQSR CCEEEECCEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHH TNSFDYDMIMKSYTSSLSPGNEQLGRWSSAARTREGTDSFAGANDPDIDTLIDHLLRARS CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC AEDFTAAVRSYDRLLLSGHYVLPLYHIDQQWVAHSKRIGGPDSVPLNGYQLPVWWDTSVQ CHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC >Mature Secondary Structure MLRIVVPLVLSLLCGAVAAEPLHGIAMHGEPGLPADYKHFPYVNPDVKKGGKITYGVVGT CEEEHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEC FDSLNPFILKSMRTTARGMWDPEYGNLVYESLMQRSRDEPFTLYGLLAETVEWDDARSFI CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCEEE QFNLNPKAKWADGQPVTPEDVMFTFELMRDKGRVPFANRLNVVAKMEKVGENSVRFTFND EEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC KADRETPLIFGLFPVLPKHAIDPETFDRSSLTPPVGSGPYKVKTVKPGESITYERDPNYW CCCCCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCC GKDIPSKVGTDNYDQITVQYFLQDTTLFEAFKKGDVDVYPDGNPGHWANAYNFPAVTSGA CCCCCHHCCCCCCCEEEEEEEEHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCC VVKDVFTPKLPSGMLGFVFNTRRPIFADTKVREGLSLVFDFEWANKNLYSGAYKRTQSFW HHHHHCCCCCCCCCEEEEEECCCCCEECCHHHCCCEEEEEEEECCCCHHHHHHHHHHHHH QNSELSSFGVPANAAELALLGPIKDKIAPAILDGTYKLPVTDGSGRDRDVLKQAVGLLKQ CCCCCCCCCCCCCCCCEEEECCHHHHHCHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHC GGYTIQGGKMLDASGRQLAFEIMTQNADQEKLAIAYQRSLQTIGIAASIRTVDDSQYQSR CCEEEECCEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCHHHHHH TNSFDYDMIMKSYTSSLSPGNEQLGRWSSAARTREGTDSFAGANDPDIDTLIDHLLRARS CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCC AEDFTAAVRSYDRLLLSGHYVLPLYHIDQQWVAHSKRIGGPDSVPLNGYQLPVWWDTSVQ CHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA