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The map label for this gene is aapJ [H]

Identifier: 209549162

GI number: 209549162

Start: 1588134

End: 1589159

Strand: Reverse

Name: aapJ [H]

Synonym: Rleg2_1563

Alternate gene names: 209549162

Gene position: 1589159-1588134 (Counterclockwise)

Preceding gene: 209549164

Following gene: 209549161

Centisome position: 35.02

GC content: 58.77

Gene sequence:

>1026_bases
ATGAAGAACAAGCTTCTGTCCGCCGTTATCGGCGCAGCAGTTTTCGCTCTTGGCACCTCGGCTGCCTCGGCCACCACTCT
CGGAGACGTCAAAGCGAAGGGTTTCGTGCAATGCGGCGTCAATACCGGTCTTACTGGCTTTGCCGCGCCTGACGCTTCCG
GTAATTGGGCCGGCTTCGACGTCGACTTCTGCAAGGCCGTCGCTTCGGCTGTGTTCGGCGACCCCACCAAAGTCAAGTAC
ACGCCGACAAACGCGAAGGAACGCTTCACCGCCCTGCAGTCCGGTGAAATCGACGTCCTCTCGCGCAATACGACCTGGAC
GATCAATCGCGACACCGCACTCGGCTTCAACTTCCGTCCTGTCACCTATTACGACGGCCAGGGCTTCATGGTGCGCAAGA
GCCTGAACGTGAAGTCGGCTCTCGAACTCTCCGGCGCCGCAATCTGCGTGCAGTCGGGCACGACCACGGAACTGAACCTC
GCCGATTACTTCAAGACGAACAATCTGCAGTACAATCCGGTCGTCTTCGAAAACCTTCCTGAGGTCAACGCTGCCTACGA
CGCCGGTCGTTGCGACGTTTACACGACCGACCAATCCGGGCTCTATTCATTGCGTCTGACGCTGAAGAACCCCGACGAAC
ACGTCATCCTCCCTGAGATCATCTCCAAGGAACCGCTCGGCCCAGCCGTCCGTCAGGGCGATGATCAGTGGTTCGATATC
GTTTCCTGGACGGCTTATGCGCTGATCAATGCCGAAGAGTTCGGCATCACCCAGGCAAATGTCGACGAGATGAAGAATTC
GCCGAACCCGGACATCAAGCGCTTCCTCGGCAGCGAGACCGACACCAAGATCGGCACGGATCTCGGCCTGACCAATGATT
GGGCCGCCAACGTCATCAAGGGCGTCGGCAACTATGGCGAAATCTTCGAGCGCAACATCGGCCAGGGTAGCCCGCTCAAG
ATCGCCCGCGGCTTGAATGCTCTCTGGAACAAGGGCGGCATCCAGTACGCACCGCCGGTTCGTTAA

Upstream 100 bases:

>100_bases
TACTCGCGCCGGGAGGGTGTCGAGACATTGGGGGCGGCAGGTTTTTCCGCCGGAACTTCCCCACAAGAAAATATAAGACA
ACGGAAAAGGTTGGGAAAAA

Downstream 100 bases:

>100_bases
TCGAGCCTTGGCATGAAATGCCGGGAAGGCGGCCAGCCGCCTTCCCGCTTCTAAAAAGTCAAAAAGAAAGCCCGAAAACG
GGCACAAGGGGATTGGCGCG

Product: cationic amino acid ABC transporter periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFDVDFCKAVASAVFGDPTKVKY
TPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRPVTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNL
ADYFKTNNLQYNPVVFENLPEVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI
VSWTAYALINAEEFGITQANVDEMKNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVIKGVGNYGEIFERNIGQGSPLK
IARGLNALWNKGGIQYAPPVR

Sequences:

>Translated_341_residues
MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFDVDFCKAVASAVFGDPTKVKY
TPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRPVTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNL
ADYFKTNNLQYNPVVFENLPEVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI
VSWTAYALINAEEFGITQANVDEMKNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVIKGVGNYGEIFERNIGQGSPLK
IARGLNALWNKGGIQYAPPVR
>Mature_341_residues
MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFDVDFCKAVASAVFGDPTKVKY
TPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRPVTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNL
ADYFKTNNLQYNPVVFENLPEVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI
VSWTAYALINAEEFGITQANVDEMKNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVIKGVGNYGEIFERNIGQGSPLK
IARGLNALWNKGGIQYAPPVR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 36792; Mature: 36792

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCC
VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCEEEEECCCEEEEECCCEECCCCCE
VTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP
EEEECCCCEEEEECCCCHHHHCCCCEEEEEECCCCCEEEHHHHHCCCCEEECCCCCCCCC
EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI
CCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEHHHHCCCCCCHHHHCCCCHHHHH
VSWTAYALINAEEFGITQANVDEMKNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVIK
HHEEEEEEEEHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
GVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR
HCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKNKLLSAVIGAAVFALGTSAASATTLGDVKAKGFVQCGVNTGLTGFAAPDASGNWAGFD
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCEEECCCCCCCCCCCC
VDFCKAVASAVFGDPTKVKYTPTNAKERFTALQSGEIDVLSRNTTWTINRDTALGFNFRP
HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCEEEEECCCEEEEECCCEECCCCCE
VTYYDGQGFMVRKSLNVKSALELSGAAICVQSGTTTELNLADYFKTNNLQYNPVVFENLP
EEEECCCCEEEEECCCCHHHHCCCCEEEEEECCCCCEEEHHHHHCCCCEEECCCCCCCCC
EVNAAYDAGRCDVYTTDQSGLYSLRLTLKNPDEHVILPEIISKEPLGPAVRQGDDQWFDI
CCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEHHHHCCCCCCHHHHCCCCHHHHH
VSWTAYALINAEEFGITQANVDEMKNSPNPDIKRFLGSETDTKIGTDLGLTNDWAANVIK
HHEEEEEEEEHHHHCCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
GVGNYGEIFERNIGQGSPLKIARGLNALWNKGGIQYAPPVR
HCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]