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The map label for this gene is yfdZ [C]

Identifier: 209549139

GI number: 209549139

Start: 1563343

End: 1564500

Strand: Direct

Name: yfdZ [C]

Synonym: Rleg2_1540

Alternate gene names: 209549139

Gene position: 1563343-1564500 (Clockwise)

Preceding gene: 209549131

Following gene: 209549142

Centisome position: 34.45

GC content: 63.99

Gene sequence:

>1158_bases
TTGTTTTCCATATCGAAACGCAGCGAAGTCGAGCCTTTTCATGCCATGGACGTGCTGGCGGAGGCGACCAAACGGCGCGC
AGCCGGCCATCCGGTGATTTCGATGGCGGTCGGTCAGCCCTCGCATCCGGCCCCCCAGGCAGCCCTCGAAGCCGCGCGCG
CAGCCCTTGCCGAAGGCCGGATCGGTTACACCGATGCGCTGGGGACGGCGCGGCTGAAATCGGCCCTTGCCCAGCATTAC
AAAGATCGCCACGGGCTAAAAATCGATCCCACGCGGATCGCCATCACCACCGGTTCCTCGGCCGGCTTCAATCTCGCCTT
CCTGTCGCTCTTCGATGCCGGCGATGCGGTGGCGATCGCAAGACCCGGTTATCCCGCCTATCGCAATATCCTCGGCGCGC
TTGGCCTGAAGGTTGTCGAAGTGCCGGTAACCGCCGAGACCCACTTCACCCTGACGCCTGAAAGTCTCGAGTTGGCGCAG
AAGGAAAGCGGCCTGACGCTGAAAGGCGTGCTGCTCGCCAGCCCCGCCAACCCGACCGGCACGGTGACCGGCCGCGATGG
GCTGAAGGCGCTTGCGGATTATTGCGCGGCCCATTCTATCGCCTTCATCTCCGACGAAATCTACCACGGGCTGACCTTCG
CTGGCGAAGAGGCGAGCGCGCTGGAGCTGACCGACGAGGCGATCGTCATCAACTCCTTCTCCAAATATTATTGCATGACC
GGCTGGCGAATCGGCTGGATGGTGCTGCCGGAACGCCTGGTGCGGCCGATCGAGCGGGTGGCGCAGAGCCTCTATATCTC
CCCGCCCGAGCTCTCCCAGATCGCCGCGGTGGCCGCGCTCGGCGCCGGCGCCGAACTCGACCGCTACAAGGCGAGCTATG
CCGCCAACCGCGACTTGCTGATGAAGCGCCTGCCGCAGATCGGCCTGTCGATCGCCTCGCCGATGGACGGCGCCTTCTAC
GCCTATCTCGACGTCACCCGCTTCACCAATGACAGCATGGGTTTTGCCAAGCGCATGCTCGCGGAAATCGACGTCGCCGC
AACACCCGGTCTCGACTTCGATCCGCTGGAGGGACATCGAACCTTGCGTCTGTCCTATGCGGGCTCGCAAGCCGAGATCG
CCGAGGCGGTAGAGCGAATCGCAGCCTGGTTGAAGTAG

Upstream 100 bases:

>100_bases
CAGGAATTTTCACCCCCGCGCGGCCCTCGCGGGATTGTGATGAGCCGATTAATGCGGCAATTGTCGGGCCATCATTGCAG
AAGCCGAGCGAGAAGCGATC

Downstream 100 bases:

>100_bases
CGCAGGCAGGCCAGCGGCTGCCTGCTCTCCTATCGCTTAACTGCGCGATGAAAACAGCGAGGCGAGCGTCGAAGACGGCT
TGTTGTTCAGCCGCGGCACG

Product: class I and II aminotransferase

Products: NA

Alternate protein names: AspAT; Transaminase A [H]

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MFSISKRSEVEPFHAMDVLAEATKRRAAGHPVISMAVGQPSHPAPQAALEAARAALAEGRIGYTDALGTARLKSALAQHY
KDRHGLKIDPTRIAITTGSSAGFNLAFLSLFDAGDAVAIARPGYPAYRNILGALGLKVVEVPVTAETHFTLTPESLELAQ
KESGLTLKGVLLASPANPTGTVTGRDGLKALADYCAAHSIAFISDEIYHGLTFAGEEASALELTDEAIVINSFSKYYCMT
GWRIGWMVLPERLVRPIERVAQSLYISPPELSQIAAVAALGAGAELDRYKASYAANRDLLMKRLPQIGLSIASPMDGAFY
AYLDVTRFTNDSMGFAKRMLAEIDVAATPGLDFDPLEGHRTLRLSYAGSQAEIAEAVERIAAWLK

Sequences:

>Translated_385_residues
MFSISKRSEVEPFHAMDVLAEATKRRAAGHPVISMAVGQPSHPAPQAALEAARAALAEGRIGYTDALGTARLKSALAQHY
KDRHGLKIDPTRIAITTGSSAGFNLAFLSLFDAGDAVAIARPGYPAYRNILGALGLKVVEVPVTAETHFTLTPESLELAQ
KESGLTLKGVLLASPANPTGTVTGRDGLKALADYCAAHSIAFISDEIYHGLTFAGEEASALELTDEAIVINSFSKYYCMT
GWRIGWMVLPERLVRPIERVAQSLYISPPELSQIAAVAALGAGAELDRYKASYAANRDLLMKRLPQIGLSIASPMDGAFY
AYLDVTRFTNDSMGFAKRMLAEIDVAATPGLDFDPLEGHRTLRLSYAGSQAEIAEAVERIAAWLK
>Mature_385_residues
MFSISKRSEVEPFHAMDVLAEATKRRAAGHPVISMAVGQPSHPAPQAALEAARAALAEGRIGYTDALGTARLKSALAQHY
KDRHGLKIDPTRIAITTGSSAGFNLAFLSLFDAGDAVAIARPGYPAYRNILGALGLKVVEVPVTAETHFTLTPESLELAQ
KESGLTLKGVLLASPANPTGTVTGRDGLKALADYCAAHSIAFISDEIYHGLTFAGEEASALELTDEAIVINSFSKYYCMT
GWRIGWMVLPERLVRPIERVAQSLYISPPELSQIAAVAALGAGAELDRYKASYAANRDLLMKRLPQIGLSIASPMDGAFY
AYLDVTRFTNDSMGFAKRMLAEIDVAATPGLDFDPLEGHRTLRLSYAGSQAEIAEAVERIAAWLK

Specific function: Unknown

COG id: COG0436

COG function: function code E; Aspartate/tyrosine/aromatic aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI95147551, Length=400, Percent_Identity=26.5, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI169881279, Length=400, Percent_Identity=26.5, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI56713254, Length=404, Percent_Identity=25.7425742574257, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI56713256, Length=404, Percent_Identity=25.7425742574257, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI169881281, Length=393, Percent_Identity=22.64631043257, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI4507369, Length=381, Percent_Identity=22.8346456692913, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI1788722, Length=387, Percent_Identity=28.6821705426357, Blast_Score=129, Evalue=4e-31,
Organism=Escherichia coli, GI1786816, Length=365, Percent_Identity=30.4109589041096, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1788627, Length=364, Percent_Identity=25.8241758241758, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1787710, Length=240, Percent_Identity=28.75, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790797, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71994476, Length=404, Percent_Identity=26.2376237623762, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71994472, Length=404, Percent_Identity=26.2376237623762, Blast_Score=101, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17567369, Length=299, Percent_Identity=26.4214046822742, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17567663, Length=351, Percent_Identity=22.2222222222222, Blast_Score=74, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322401, Length=386, Percent_Identity=24.0932642487047, Blast_Score=110, Evalue=3e-25,
Organism=Drosophila melanogaster, GI18859735, Length=384, Percent_Identity=26.8229166666667, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI28573069, Length=358, Percent_Identity=24.5810055865922, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24646114, Length=358, Percent_Identity=24.5810055865922, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28573067, Length=358, Percent_Identity=24.5810055865922, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI28573065, Length=358, Percent_Identity=24.5810055865922, Blast_Score=100, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001176
- InterPro:   IPR004839
- InterPro:   IPR004838
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.1 [H]

Molecular weight: Translated: 41251; Mature: 41251

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSISKRSEVEPFHAMDVLAEATKRRAAGHPVISMAVGQPSHPAPQAALEAARAALAEGR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC
IGYTDALGTARLKSALAQHYKDRHGLKIDPTRIAITTGSSAGFNLAFLSLFDAGDAVAIA
CCCHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
RPGYPAYRNILGALGLKVVEVPVTAETHFTLTPESLELAQKESGLTLKGVLLASPANPTG
CCCCHHHHHHHHHCCCEEEEEEEECCEEEEECCHHHHHHHHCCCCEEEEEEEECCCCCCC
TVTGRDGLKALADYCAAHSIAFISDEIYHGLTFAGEEASALELTDEAIVINSFSKYYCMT
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCEEEEECCCCEEEEC
GWRIGWMVLPERLVRPIERVAQSLYISPPELSQIAAVAALGAGAELDRYKASYAANRDLL
CCEEHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH
MKRLPQIGLSIASPMDGAFYAYLDVTRFTNDSMGFAKRMLAEIDVAATPGLDFDPLEGHR
HHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCE
TLRLSYAGSQAEIAEAVERIAAWLK
EEEEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFSISKRSEVEPFHAMDVLAEATKRRAAGHPVISMAVGQPSHPAPQAALEAARAALAEGR
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCC
IGYTDALGTARLKSALAQHYKDRHGLKIDPTRIAITTGSSAGFNLAFLSLFDAGDAVAIA
CCCHHHHHHHHHHHHHHHHHHHCCCCEECCCEEEEEECCCCCCEEEEEEEECCCCEEEEE
RPGYPAYRNILGALGLKVVEVPVTAETHFTLTPESLELAQKESGLTLKGVLLASPANPTG
CCCCHHHHHHHHHCCCEEEEEEEECCEEEEECCHHHHHHHHCCCCEEEEEEEECCCCCCC
TVTGRDGLKALADYCAAHSIAFISDEIYHGLTFAGEEASALELTDEAIVINSFSKYYCMT
EEECCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEECCCEEEEECCCCEEEEC
GWRIGWMVLPERLVRPIERVAQSLYISPPELSQIAAVAALGAGAELDRYKASYAANRDLL
CCEEHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHH
MKRLPQIGLSIASPMDGAFYAYLDVTRFTNDSMGFAKRMLAEIDVAATPGLDFDPLEGHR
HHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCEECCCCCCCCCCCCE
TLRLSYAGSQAEIAEAVERIAAWLK
EEEEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]