| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is cysJ [H]
Identifier: 209400763
GI number: 209400763
Start: 3714614
End: 3716413
Strand: Reverse
Name: cysJ [H]
Synonym: ECH74115_4018
Alternate gene names: 209400763
Gene position: 3716413-3714614 (Counterclockwise)
Preceding gene: 209396000
Following gene: 209400070
Centisome position: 66.7
GC content: 56.61
Gene sequence:
>1800_bases ATGACGACACAGGTCCCACCTTCCGCGTTGCTTCCGTTGAACCCGGAGCAACTGGCACGCCTTCAGGCGGCCACGACCGA TTTAACTCCCACCCAGCTTGCCTGGGTTTCTGGCTATTTCTGGGGCGTGCTCAATCAGCAGCCTGCTGCGCTTGCAGCGA CGCCAGCGCCAGCCGCAGAAATGCCGGGTATAACTATTATCTCTGCTTCGCAAACCGGCAATGCGCGCCGGGTTGCTGAA GCATTACGCGATGATTTATTGACGGCAAAACTGAACGTTAAGCTGGTGAACGCGGGCGACTATAAATTCAAACAAATCGC CAGCGAAAAACTGCTTATCGTGGTGACGTCAACGCAAGGAGAAGGGGAACCGCCGGAAGAAGCCGTCGCGCTGCATAAGT TCCTGTTCTCCAAAAAAGCGCCGAAGCTGGAAAATACCGCTTTTGCCGTGTTTAGCCTCGGCGATAGTTCTTATGAATTT TTCTGCCAGTCCGGGAAAGATTTCGACAGCAAGCTGGCGGAACTGGGCGGTGAACGCCTGCTCGACCGTGTCGACGCCGA CGTTGAATACCAGGCTGCTGCCAGCGAGTGGCGCGCCCGCGTGGTTGATGCGCTTAAATCGCGTGCGCCTGTCGCGGCAC CTTCGCAATCCGTCGCTACTGGCGTGGTAAATGAAATCCACACCAGCCCGTACAGCAAAGACGCGCCGCTGGTAGCGAGC CTTTCGGTTAACCAGAAAATTACCGGGCGTAACTCTGAAAAAGACGTTCGCCATATCGAAATTGACTTAGGTGACTCGGG CCTGCGTTACCAGCCGGGTGACGCGCTGGGTGTCTGGTATCAGAACGATCCGGCACTGGTGAAAGAACTTGTCGAACTGC TGTGGCTGAAAGGCGATGAACCTGTCACCGTCGAGGGCAAAACGTTGCCTCTGAACGAAGCGCTACAGTGGCACTTCGAA CTGACCGTCAACACCGCCAATATTGTTGAGAACTATGCCACGCTTACCCGCAGCGAAACGCTGTTGCCGCTGGTGGGCGA TAAAGCGAAGTTACAGCATTACGCCGCGACTACGCCGATTGTCGACATGGTGCGCTTCTCTCCGGCGCAACTGGACGCCG AAGCGCTGATTAATCTGCTGCGCCCGCTGACGCCGCGTCTGTATTCCATCGCCTCCTCGCAGGAGGAAGTCGAGAACGAA GTACACGTCACCGTTGGTGTGGTGCGTTACGACGTGGAAGGCCGCGCCCGTGCCGGTGGTGCCTCCAGCTTCCTCGCGGA CCGCGTGGAAGAAGAGGGCGAAGTTCGCGTATTTATCGAACATAACGATAACTTCCGCCTGCCCGCTAACCCGGAAACCC CGGTGATTATGATTGGCCCAGGCACCGGCATCGCGCCGTTCCGCGCCTTTATGCAGCAGCGCGCCGCTGACGAAGCGCCG GGTAAAAACTGGCTGTTCTTTGGCAACCCGCACTTTACGGAAGATTTCCTCTACCAGGTGGAGTGGCAGCGTTACGTCAA AGAGGGCGTGCTGACGCGTATCGATCTTGCCTGGTCGCGCGATCAAAAAGAAAAAGTTTACGTACAAGACAAACTGCGCG AACAGGGCGCGGAGCTGTGGCGCTGGATCAATGACGGTGCCCACATTTATGTCTGCGGCGACGCTAATCGCATGGCGAAA GACGTTGAGCAGGCACTTCTGGAAGTGATTGCCGAATTTGGTGGCATGGACACCGAAGCGGCGGATGAATTTTTAAGTGA GCTGCGCGTAGAGCGCCGTTATCAGCGAGATGTCTACTAA
Upstream 100 bases:
>100_bases TTAATCCACACCGTTCACCCCGTTAACCTTACCTTCTCTTCTGTTTTATGGGCGCTGACAGGGCGCAGAAACAGCTTTGC TTACTGGAACATAACGACGC
Downstream 100 bases:
>100_bases TGAGCGAAAAACATCCAGGGCCTTTAGTGGTCGAAGGAAAACTGACAGACGCCGAGCGCATGAAGCTTGAAAGCAACTAC CTGCGCGGCACCATTGCGGA
Product: sulfite reductase subunit alpha
Products: NA
Alternate protein names: SiR-FP [H]
Number of amino acids: Translated: 599; Mature: 598
Protein sequence:
>599_residues MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAE ALRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVAS LSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFE LTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQEEVENE VHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAK DVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
Sequences:
>Translated_599_residues MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAE ALRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVAS LSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFE LTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQEEVENE VHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAK DVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY >Mature_598_residues TTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAEMPGITIISASQTGNARRVAEA LRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFF CQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVASL SVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFEL TVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQEEVENEV HVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAPG KNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKD VEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY
Specific function: Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow f
COG id: COG0369
COG function: function code P; Sulfite reductase, alpha subunit (flavoprotein)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 flavodoxin-like domain [H]
Homologues:
Organism=Homo sapiens, GI127139033, Length=601, Percent_Identity=30.4492512479201, Blast_Score=244, Evalue=2e-64, Organism=Homo sapiens, GI7657393, Length=601, Percent_Identity=29.9500831946755, Blast_Score=231, Evalue=1e-60, Organism=Homo sapiens, GI221316709, Length=601, Percent_Identity=29.9500831946755, Blast_Score=226, Evalue=3e-59, Organism=Homo sapiens, GI24041029, Length=597, Percent_Identity=30.820770519263, Blast_Score=225, Evalue=9e-59, Organism=Homo sapiens, GI221316705, Length=610, Percent_Identity=29.5081967213115, Blast_Score=224, Evalue=2e-58, Organism=Homo sapiens, GI10835173, Length=651, Percent_Identity=29.6466973886329, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI221316707, Length=530, Percent_Identity=29.622641509434, Blast_Score=199, Evalue=4e-51, Organism=Homo sapiens, GI40254422, Length=649, Percent_Identity=27.4268104776579, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI169790956, Length=437, Percent_Identity=28.604118993135, Blast_Score=161, Evalue=2e-39, Organism=Homo sapiens, GI169790958, Length=437, Percent_Identity=28.604118993135, Blast_Score=160, Evalue=3e-39, Organism=Escherichia coli, GI1789123, Length=599, Percent_Identity=99.1652754590985, Blast_Score=1218, Evalue=0.0, Organism=Caenorhabditis elegans, GI17554134, Length=636, Percent_Identity=29.0880503144654, Blast_Score=233, Evalue=3e-61, Organism=Caenorhabditis elegans, GI17566446, Length=583, Percent_Identity=26.5866209262436, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17531441, Length=394, Percent_Identity=25.3807106598985, Blast_Score=97, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6321832, Length=640, Percent_Identity=28.75, Blast_Score=208, Evalue=3e-54, Organism=Saccharomyces cerevisiae, GI6321143, Length=397, Percent_Identity=31.4861460957179, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6325305, Length=626, Percent_Identity=23.3226837060703, Blast_Score=131, Evalue=4e-31, Organism=Drosophila melanogaster, GI17137192, Length=624, Percent_Identity=28.2051282051282, Blast_Score=218, Evalue=1e-56, Organism=Drosophila melanogaster, GI24582192, Length=510, Percent_Identity=30, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI78706872, Length=524, Percent_Identity=32.4427480916031, Blast_Score=185, Evalue=1e-46, Organism=Drosophila melanogaster, GI24583543, Length=524, Percent_Identity=32.4427480916031, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI78706876, Length=524, Percent_Identity=32.4427480916031, Blast_Score=184, Evalue=1e-46, Organism=Drosophila melanogaster, GI24660907, Length=593, Percent_Identity=26.4755480607083, Blast_Score=155, Evalue=9e-38, Organism=Drosophila melanogaster, GI24660903, Length=593, Percent_Identity=26.4755480607083, Blast_Score=155, Evalue=9e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010199 - InterPro: IPR003097 - InterPro: IPR017927 - InterPro: IPR001094 - InterPro: IPR008254 - InterPro: IPR001709 - InterPro: IPR023173 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00667 FAD_binding_1; PF00258 Flavodoxin_1; PF00175 NAD_binding_1 [H]
EC number: =1.8.1.2 [H]
Molecular weight: Translated: 66382; Mature: 66251
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAE CCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH MPGITIISASQTGNARRVAEALRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQG CCCEEEEECCCCCCHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHCCCCEEEEEECCCC EGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERL CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHCHHHH LDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVAS HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE LSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDE EECCCEECCCCCCCCCEEEEEEECCCCCEECCCCEEEEEECCCHHHHHHHHHHHHCCCCC PVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPI CEEECCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCH VDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQEEVENEVHVTVGVVRYDVEGRARAGG HHHHHCCCHHCCHHHHHHHHHCCCHHHHHHHCCHHHHCCCEEEEEEEEEEECCCCCCCCC ASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP HHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCC GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELW CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH RWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY HHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVLNQQPAALAATPAPAAE CCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCHHH MPGITIISASQTGNARRVAEALRDDLLTAKLNVKLVNAGDYKFKQIASEKLLIVVTSTQG CCCEEEEECCCCCCHHHHHHHHHHHHEEEEEEEEEEECCCCHHHHHCCCCEEEEEECCCC EGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEFFCQSGKDFDSKLAELGGERL CCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHCCCCCCHHHHHHHHCHHHH LDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSVATGVVNEIHTSPYSKDAPLVAS HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEE LSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDE EECCCEECCCCCCCCCEEEEEEECCCCCEECCCCEEEEEECCCHHHHHHHHHHHHCCCCC PVTVEGKTLPLNEALQWHFELTVNTANIVENYATLTRSETLLPLVGDKAKLQHYAATTPI CEEECCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHCCCCH VDMVRFSPAQLDAEALINLLRPLTPRLYSIASSQEEVENEVHVTVGVVRYDVEGRARAGG HHHHHCCCHHCCHHHHHHHHHCCCHHHHHHHCCHHHHCCCEEEEEEEEEEECCCCCCCCC ASSFLADRVEEEGEVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAADEAP HHHHHHHHHCCCCCEEEEEEECCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCC GKNWLFFGNPHFTEDFLYQVEWQRYVKEGVLTRIDLAWSRDQKEKVYVQDKLREQGAELW CCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH RWINDGAHIYVCGDANRMAKDVEQALLEVIAEFGGMDTEAADEFLSELRVERRYQRDVY HHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA