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The map label for this gene is ybfE [H]

Identifier: 209400738

GI number: 209400738

Start: 794904

End: 795266

Strand: Reverse

Name: ybfE [H]

Synonym: ECH74115_0780

Alternate gene names: 209400738

Gene position: 795266-794904 (Counterclockwise)

Preceding gene: 209396278

Following gene: 209400113

Centisome position: 14.27

GC content: 53.44

Gene sequence:

>363_bases
ATGTATTATGGCGCGCTATCCATCCGGGCAGAGGCCTGGCTGATTGTTTCCCCCGAAGTCACCAAGATCATGGCCAAAGA
ACAAACGGACCGTACGACATTAGATCTGTTCGCGCACGAGCGTCGACCGGGACGACCGAAAACAAATCCGCTTTCGCGCG
ATGAACAGCTGCGTATTAATAAACGCAACCAACTAAAACGCGACAAAGTACGTGGCCTAAAGCGTGTCGAACTGAAGCTG
AACGCGGAAGCTGTCGAGGCGCTGAACGAGCTGGCGGAATCGCGCAATATGAGCCGTAGCGAACTGATCGAAGAGATGTT
AATGCAGCAACTGGCGGCGCTGCGTAGTCAGGGCATCGTTTAA

Upstream 100 bases:

>100_bases
CGCGCTATCCGTCGCTATCTCAATGATTAACGCAACTGATTAAAAACCCAGCGTCCGCGTCGCTTTCCGCGCGTGGGCGT
TGGCGTGACTCATCGCGCTG

Downstream 100 bases:

>100_bases
ATTTCCACTTTCATGTAGCACAGTGTGCAGTCCTGCTCGTTTGCTGATTCCGCAAGACTGCCTGTTCTGCTATGATTGCC
TTTATCCGTGGGCAATTTTC

Product: LexA regulated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKL
NAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV

Sequences:

>Translated_120_residues
MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKL
NAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV
>Mature_120_residues
MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKL
NAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081770, Length=97, Percent_Identity=100, Blast_Score=193, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002145 [H]

Pfam domain/function: PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 13873; Mature: 13873

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRIN
CCCCCEEECCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHCCCC
KRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV
HHHHHHHHHHCCHHHHHEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPGRPKTNPLSRDEQLRIN
CCCCCEEECCCEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHHCCCC
KRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSELIEEMLMQQLAALRSQGIV
HHHHHHHHHHCCHHHHHEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]