Click here to switch to the map view.

The map label for this gene is ydfR [H]

Identifier: 209400730

GI number: 209400730

Start: 3587646

End: 3587990

Strand: Reverse

Name: ydfR [H]

Synonym: ECH74115_3877

Alternate gene names: 209400730

Gene position: 3587990-3587646 (Counterclockwise)

Preceding gene: 209398639

Following gene: 209400167

Centisome position: 64.39

GC content: 46.96

Gene sequence:

>345_bases
ATGAAGAAAAAATACGAACTGGTTGTTAAAGGGATAAATAATTACCCGGATAAGATTACTGTTACTGTGGCACTGGAAAT
TGGTGGGTATCCGTCACTGTTGTTGCCAGATGTGGCGATTAGTCTTGACCGTACTGAAGGTGCCACGCTGGAGTTTTACG
AAGCTGAGGCGAAAAAGCAGGCGAAGCAGTTTTTCATGGATGTTGCTGCCGGGTTATGTGAAGGGGATGGTCCGTTACCG
GAAAAGCGTCCCGTAATTTTAGAGGCGCAGGATGTGTTGATAACCTACAGAGGAAAACTACCGGGAATAATTACGGGTTC
TCTGAAGACTCCACCGCTGGCCTGA

Upstream 100 bases:

>100_bases
GTGCTGGGGAGTCTGCTGTTTGGGCTGCTGACATATCTGACGAACCTGTATTTCAAGATTAAAGAAGACCGGCGTAAGGC
GGCGCGGGGAGAGTAAAGTG

Downstream 100 bases:

>100_bases
AGACTTAACATATCTAGGGATTTGAAATCGATAAACCCTGATAAATATCCATGAACGCAAAAATCAGATACGGCCTGTCG
GCTGCCGTTCTGGCGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLP
EKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA

Sequences:

>Translated_114_residues
MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLP
EKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA
>Mature_114_residues
MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLP
EKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787837, Length=74, Percent_Identity=47.2972972972973, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009759 [H]

Pfam domain/function: PF07041 DUF1327 [H]

EC number: NA

Molecular weight: Translated: 12392; Mature: 12392

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQ
CCCCEEEEEECCCCCCCEEEEEEEEEECCCCCEECCCEEEEEECCCCCEEEEEHHHHHHH
AKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECEEEEEECCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MKKKYELVVKGINNYPDKITVTVALEIGGYPSLLLPDVAISLDRTEGATLEFYEAEAKKQ
CCCCEEEEEECCCCCCCEEEEEEEEEECCCCCEECCCEEEEEECCCCCEEEEEHHHHHHH
AKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPGIITGSLKTPPLA
HHHHHHHHHHHHCCCCCCCCCCCCEEEEECEEEEEECCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]