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The map label for this gene is 209400566

Identifier: 209400566

GI number: 209400566

Start: 4692361

End: 4692798

Strand: Reverse

Name: 209400566

Synonym: ECH74115_5045

Alternate gene names: NA

Gene position: 4692798-4692361 (Counterclockwise)

Preceding gene: 209400189

Following gene: 209399300

Centisome position: 84.22

GC content: 55.02

Gene sequence:

>438_bases
TTGGCTGCCTATGAAAAATCGAAAGGTCCTGAGGCTTTAGGTTTTAAGCCCGCCCGTCAGGCACCGCCGCCACCGACAAG
TGGACAGGCATCCGGGGCATCCCGACCTTTACCGCCCATTGCACAGGCATTAAAAGAGCACTTGGCTGCCTATGAAAAAT
CGAAAGGTCCTGAGGCTTTAGGTTTTAAGCCCGCCCGTCAGGCACCGCCGCCACCGACAAGTGGACAGGCATCCGGGGCA
TCCCGACCTTTACCGCCCATTGCACAGGCATTAAAAGAGCACTTGGCTGCCTATGAAAAATCGAAAGGTCCTGAGGCTTT
AGGTTTTAAGCCCGCCCGTCAGGCACCACCGCCACCGACAGGGCCTAGTGGACTACCGCCCCTTGCACAGGCATTAAAAG
ATCATTTAGCTGCCTATGAGCAATCGAAGAAAGGGTAA

Upstream 100 bases:

>100_bases
ATTTACTCCCTCTCGTCCGGCACCGCCGCCACCGACAAGTGGACAGGCATCCGGGGCATCCCGACCTTTACCGCCCATTG
CACAGGCATTAAAAGAGCAC

Downstream 100 bases:

>100_bases
CCAACTAATAAAAACCGATATCAAATTGTGTGGTAATAAATGTGATTAGTAATATCGGTTTTTATTGGAGGGGTAATAAA
TAATGTATTATTATACGGTG

Product: EspF

Products: NA

Alternate protein names: T3SS Effector Protein EspF; LEE-Encoded Effector EspF

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGA
SRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTGPSGLPPLAQALKDHLAAYEQSKKG

Sequences:

>Translated_145_residues
MAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGA
SRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTGPSGLPPLAQALKDHLAAYEQSKKG
>Mature_144_residues
AAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTSGQASGAS
RPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPTGPSGLPPLAQALKDHLAAYEQSKKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14902; Mature: 14771

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
GFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GPSGLPPLAQALKDHLAAYEQSKKG
CCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AAYEKSKGPEALGFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
GFKPARQAPPPPTSGQASGASRPLPPIAQALKEHLAAYEKSKGPEALGFKPARQAPPPPT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
GPSGLPPLAQALKDHLAAYEQSKKG
CCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA