Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
---|---|
Accession | NC_011353 |
Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209400486
Identifier: 209400486
GI number: 209400486
Start: 3581091
End: 3581507
Strand: Reverse
Name: 209400486
Synonym: ECH74115_3866
Alternate gene names: NA
Gene position: 3581507-3581091 (Counterclockwise)
Preceding gene: 209399673
Following gene: 209397455
Centisome position: 64.28
GC content: 37.41
Gene sequence:
>417_bases GTGAGAAGGCAGAGTACTAAAGATATTGATGAGTGGATAAAAGATGAACGGATAGTATATCCCTCAAGGGTGATCAACCA GGAGATTGATAATTACTGTTTTCAAAAAAATGCAAAAATTTCCACTGAAGAGAGGCAAAGAGTCTTTTTTCTTGTGAGCC AGGAGAATCAACTAACCCTTGATGTTAAGGCAGCACAAAGTTCTATTAATCATGTAATAATGGGGAGTGCTTCTTTTGGC AAGAAAATGGATGCTCTTTGTGATGGTATGAGCCGGGATGTAAAAAATCGTACATCAGATACCATAGCAAACTTGCTTGC GGACAAGTTTTACCAGAAACATATCGATTCGGATATTGATATTGTAAAACTACGAAATGATATCCCAGATTATTTGATGC GTGCTATACAGGGATGA
Upstream 100 bases:
>100_bases CTCTTTCCGAGGGAAGAATGATGAGGTCGTAAAATGTTCAATTGGAGAACGGACTATTAGCTTTTCTGTTCGCAAATTTA GCGGCAATATACTGGAAACG
Downstream 100 bases:
>100_bases GGCTAGAGGAGAGGACTGCTTCAGCATCATCGGCTTCGGACCAGTAAAAGAGACGCAGAAAATGCACAACGGCACCACAC GCCATGCATGGATTCAGATT
Product: EspM3 protein
Products: NA
Alternate protein names: Chaperone; T3SS Secreted Effector EspM-Homolog; Chaperone Protein; T3SS Secreted Effector EspM-Like Protein; EspM3 Protein; LEE-Encoded Effector Map; T3SS Effector Protein EspT
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MRRQSTKDIDEWIKDERIVYPSRVINQEIDNYCFQKNAKISTEERQRVFFLVSQENQLTLDVKAAQSSINHVIMGSASFG KKMDALCDGMSRDVKNRTSDTIANLLADKFYQKHIDSDIDIVKLRNDIPDYLMRAIQG
Sequences:
>Translated_138_residues MRRQSTKDIDEWIKDERIVYPSRVINQEIDNYCFQKNAKISTEERQRVFFLVSQENQLTLDVKAAQSSINHVIMGSASFG KKMDALCDGMSRDVKNRTSDTIANLLADKFYQKHIDSDIDIVKLRNDIPDYLMRAIQG >Mature_138_residues MRRQSTKDIDEWIKDERIVYPSRVINQEIDNYCFQKNAKISTEERQRVFFLVSQENQLTLDVKAAQSSINHVIMGSASFG KKMDALCDGMSRDVKNRTSDTIANLLADKFYQKHIDSDIDIVKLRNDIPDYLMRAIQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16005; Mature: 16005
Theoretical pI: Translated: 7.41; Mature: 7.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRQSTKDIDEWIKDERIVYPSRVINQEIDNYCFQKNAKISTEERQRVFFLVSQENQLTL CCCCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEE DVKAAQSSINHVIMGSASFGKKMDALCDGMSRDVKNRTSDTIANLLADKFYQKHIDSDID EHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH IVKLRNDIPDYLMRAIQG HHHHHHCCHHHHHHHHCC >Mature Secondary Structure MRRQSTKDIDEWIKDERIVYPSRVINQEIDNYCFQKNAKISTEERQRVFFLVSQENQLTL CCCCCCCHHHHHHHCCCEECHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEE DVKAAQSSINHVIMGSASFGKKMDALCDGMSRDVKNRTSDTIANLLADKFYQKHIDSDID EHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH IVKLRNDIPDYLMRAIQG HHHHHHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA