Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209400417
Identifier: 209400417
GI number: 209400417
Start: 1399299
End: 1400141
Strand: Direct
Name: 209400417
Synonym: ECH74115_1409
Alternate gene names: NA
Gene position: 1399299-1400141 (Clockwise)
Preceding gene: 209399211
Following gene: 209399765
Centisome position: 25.11
GC content: 48.4
Gene sequence:
>843_bases ATGTCAGATATCACAATCTCCCGTCCGGAAGTGGTCAACGGGCATACGGACGTTATCTGCTCAACCAGCATTCGCCACAT TCTGGCTGTACGAAAGAGTACACTGTTGCAAATCGACACACTTATCCGACAACTGGCTGAAATCTCGGTGCTGACGGAAA GCATCGGAGGTAAAACTGCCCCGGACTGGGCCATGAAACAGGATTTTCGCTGCGGCTGCTGGCTGATGGAGAAACCCGAA ACAGCAATGAAAGCCATTACCCGGAATCTTGATCGCGAAATCTGGCGTGACCTGATGCAACGTTCCGGGATGCTGTCATT AATGGATACGCAGGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGCGAAGCGAACATTC TGAGCACATTTGAACAACTGCACCAGAATAAGGATGAGGTGTTTGAGCGAGGGGTGATCAACGTCTTCAGAGGGCTGAAC TGGAATTACAAAACCAATTGCCCCTGTAAATTTGGCAGTAAAATTATCGTCAACAATCTGGTGAGATGGGACCGGTGGGG ATTTCATCTTATCACCGGACAACAGGCTGACCGACTCGCCGATCTGGAAAGAATGTTGCACCTGTTCAGCGGTAAACCAA TCCCCGACAACCGGGGAAACATCACCCTTCGTCTGGATGATCACATTCAGTCTGTTCAGGGTAAAGAGAGCTATGAAGAT GAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCGCATATCACGTTCAGAAAACCAGAACTGGTTGACAGACTGAA TGATATTATCGCAAAACACTATCCTGATATGCTGGCAGTATAG
Upstream 100 bases:
>100_bases GCACCAGAACCGGTGAAGCTCACTCACCAGACTTCATTCCTCTGACGCCAGCCTGCACAGGGCTAGCGTTTTCATTTATC TGCAAAAAGGAATATCGATT
Downstream 100 bases:
>100_bases CTTTGCCAGTATGCTCAAAGATCGGAAATTGTCCGATAAGATATGATCGCGGGGCATATAAACCGGTTTCAGATGGCATA CCCGATGGCATACTGTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSDITISRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISVLTESIGGKTAPDWAMKQDFRCGCWLMEKPE TAMKAITRNLDREIWRDLMQRSGMLSLMDTQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLN WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRGNITLRLDDHIQSVQGKESYED EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV
Sequences:
>Translated_280_residues MSDITISRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISVLTESIGGKTAPDWAMKQDFRCGCWLMEKPE TAMKAITRNLDREIWRDLMQRSGMLSLMDTQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLN WNYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRGNITLRLDDHIQSVQGKESYED EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV >Mature_279_residues SDITISRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISVLTESIGGKTAPDWAMKQDFRCGCWLMEKPET AMKAITRNLDREIWRDLMQRSGMLSLMDTQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLNW NYKTNCPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRGNITLRLDDHIQSVQGKESYEDE MFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32551; Mature: 32420
Theoretical pI: Translated: 7.22; Mature: 7.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDITISRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISVLTESIGGKTA CCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRSGMLSLMDTQARDTWYRSL CCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHC EYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLNWNYKTNCPCKFGSKIIVNNL CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHH VRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRGNITLRLDDHIQSVQGKESYED HHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHCCCCHHHH EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV HHHHHEEEECCCCEEEEECHHHHHHHHHHHHHHCCHHHCC >Mature Secondary Structure SDITISRPEVVNGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISVLTESIGGKTA CCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PDWAMKQDFRCGCWLMEKPETAMKAITRNLDREIWRDLMQRSGMLSLMDTQARDTWYRSL CCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHC EYDNFPEISEANILSTFEQLHQNKDEVFERGVINVFRGLNWNYKTNCPCKFGSKIIVNNL CCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHH VRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRGNITLRLDDHIQSVQGKESYED HHHCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHCCCCHHHH EMFSIRYFKKGSAHITFRKPELVDRLNDIIAKHYPDMLAV HHHHHEEEECCCCEEEEECHHHHHHHHHHHHHHCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA