| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ynfO [H]
Identifier: 209400289
GI number: 209400289
Start: 1700717
End: 1700881
Strand: Reverse
Name: ynfO [H]
Synonym: ECH74115_1780
Alternate gene names: 209400289
Gene position: 1700881-1700717 (Counterclockwise)
Preceding gene: 209400510
Following gene: 209398225
Centisome position: 30.53
GC content: 35.15
Gene sequence:
>165_bases ATGATTGAACAAATTAACATCGCTCTTGATCTGAAAGGTTCAGGAAATTTTTCAGCGTGGGTTATTGAAGCCTGCAGAAG AAGATTAATTAATGAAAAATATTCTCAATTTGTACCCAACAAAGACAAACACGACCAGAGAACCTGTTCAGACAGGTTTA CTTAA
Upstream 100 bases:
>100_bases AGATAATACAAATCAGCAACACTGAATATGGGGCAACATTATGTCATCAAAGAACAGAACCCGCAGAACAACAACCCGCA ACATCCGATTTCCAAACCAG
Downstream 100 bases:
>100_bases ACGACTTATATATGACACAAAAAGCGACCACTAAAGTCGCTTTTTCTTATGGTAACAGGCAATAACGCTCTCAGATATTT TTTAGCATTTTTTTGACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 54
Protein sequence:
>54_residues MIEQINIALDLKGSGNFSAWVIEACRRRLINEKYSQFVPNKDKHDQRTCSDRFT
Sequences:
>Translated_54_residues MIEQINIALDLKGSGNFSAWVIEACRRRLINEKYSQFVPNKDKHDQRTCSDRFT >Mature_54_residues MIEQINIALDLKGSGNFSAWVIEACRRRLINEKYSQFVPNKDKHDQRTCSDRFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081930, Length=45, Percent_Identity=73.3333333333333, Blast_Score=68, Evalue=1e-13, Organism=Escherichia coli, GI145693102, Length=33, Percent_Identity=87.8787878787879, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6344; Mature: 6344
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEQINIALDLKGSGNFSAWVIEACRRRLINEKYSQFVPNKDKHDQRTCSDRFT CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCC >Mature Secondary Structure MIEQINIALDLKGSGNFSAWVIEACRRRLINEKYSQFVPNKDKHDQRTCSDRFT CCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]