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The map label for this gene is ytfT [H]

Identifier: 209400126

GI number: 209400126

Start: 5383237

End: 5384259

Strand: Direct

Name: ytfT [H]

Synonym: ECH74115_5749

Alternate gene names: 209400126

Gene position: 5383237-5384259 (Clockwise)

Preceding gene: 209397917

Following gene: 209399118

Centisome position: 96.61

GC content: 57.77

Gene sequence:

>1023_bases
ATGCCTCAATCTCTCCCGGACACTACGCCGCCAAAAAGGCGCTTTCGCTGGCCAACGGGAATGCCGCAGCTGGCGGCACT
GTTGCTGGTGCTGCTGGTCGATAGCCTGGTGGCCCCGCATTTCTGGCAGGTGGTGCTTCAGGATGGGCGTTTGTTCGGTA
GCCCTATCGACATTCTTAATCGCGCCGCCCCCGTTGCGCTACTGGCGATTGGTATGACGCTGGTGATCGCAACAGGTGGG
ATTGATCTCTCCGTAGGGGCGGTGATGGCTATCGCCGGAGCCACAACGGCTGCGATGACGGTCGCGGGATTCAGCCTGCC
GATTGTTTTGTTAAGCGCCCTGGGCACCGGCATCCTGGCGGGATTGTGGAACGGCATACTGGTAGCGATCCTCAAAATTC
AGCCGTTTGTCGCCACTCTGATCCTGATGGTCGCCGGGCGCGGCGTGGCGCAACTGATCACCTCCGGACAGATCATCACG
TTTAACTCGCCGGATCTCTCATGGTTCGGCAGTGGATCGCTGTTGTTCCTGCCAACGCCGGTCATTATCGCGGTGCTGAC
GCTTATCCTGTTCTGGCTGTTGACCCGCAAAACGGCGCTGGGGATGTTTATCGAAGCCGTTGGTATCAACATTCGGGCGG
CAAAAAATGCCGGGGTAAACACGCGGATCATCGTCATGCTTACCTACGTGTTGAGCGGGCTGTGTGCGGCGATTGCGGGC
ATTATCGTGGCGGCGGATATTCGCGGTGCCGATGCCAACAACGCCGGATTATGGCTGGAGCTGGACGCCATTCTCGCGGT
GGTGATTGGCGGTGGTTCGCTGATGGGCGGACGTTTTAACCTACTGCTTTCGGTGGTGGGGGCGCTGATTATTCAGGGGA
TGAACACCGGAATTTTGCTTTCGGGCTTTCCGCCAGAGATGAACCAGGTGGTGAAAGCGGTGGTGGTGCTTTGCGTGCTG
ATTGTCCAGTCGCAACGCTTTATCAGTCTGATTAAAGGAGTGCGTAGCCGTGATAAAACGTAA

Upstream 100 bases:

>100_bases
ATCATCATGCGCGATCGCAAACAGGTGGCGGAGATCCCGCTGGCAGAGCTTTCCGTTCCGGCGATCATGAATGCCATTGC
GGCGTAAGGAGAACAGTGTG

Downstream 100 bases:

>100_bases
TTTGCCACTGATGATCACCATCGGCGTCTTTGTGCTGGGTTATCTCTACTGCCTGACCCAGTTTCCCGGTTTTGCTTCCA
CAAGAGTGATCTGCAATATC

Product: putative sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGG
IDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIIT
FNSPDLSWFGSGSLLFLPTPVIIAVLTLILFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG
IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVL
IVQSQRFISLIKGVRSRDKT

Sequences:

>Translated_340_residues
MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGG
IDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIIT
FNSPDLSWFGSGSLLFLPTPVIIAVLTLILFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG
IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVL
IVQSQRFISLIKGVRSRDKT
>Mature_339_residues
PQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGI
DLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIITF
NSPDLSWFGSGSLLFLPTPVIIAVLTLILFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAGI
IVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLI
VQSQRFISLIKGVRSRDKT

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=340, Percent_Identity=98.8235294117647, Blast_Score=646, Evalue=0.0,
Organism=Escherichia coli, GI1790191, Length=326, Percent_Identity=36.5030674846626, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI1788896, Length=309, Percent_Identity=33.6569579288026, Blast_Score=118, Evalue=6e-28,
Organism=Escherichia coli, GI1790524, Length=244, Percent_Identity=31.9672131147541, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI145693152, Length=263, Percent_Identity=36.1216730038023, Blast_Score=104, Evalue=9e-24,
Organism=Escherichia coli, GI1787793, Length=276, Percent_Identity=36.231884057971, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1789992, Length=330, Percent_Identity=30.9090909090909, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI87082395, Length=252, Percent_Identity=36.1111111111111, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787794, Length=274, Percent_Identity=27.3722627737226, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1788471, Length=281, Percent_Identity=29.8932384341637, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35526; Mature: 35395

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILN
CCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILA
HHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIITFNSPDLSWFGSGSLLFLPTP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCEEEECHH
VIIAVLTLILFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILL
HHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
SGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSRDKT
ECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PQSLPDTTPPKRRFRWPTGMPQLAALLLVLLVDSLVAPHFWQVVLQDGRLFGSPIDILN
CCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
RAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVAGFSLPIVLLSALGTGILA
HHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIITFNSPDLSWFGSGSLLFLPTP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCEEEEECCCCCCEECCCCEEEECHH
VIIAVLTLILFWLLTRKTALGMFIEAVGINIRAAKNAGVNTRIIVMLTYVLSGLCAAIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
IIVAADIRGADANNAGLWLELDAILAVVIGGGSLMGGRFNLLLSVVGALIIQGMNTGILL
HHHHHCCCCCCCCCCCEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEE
SGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGVRSRDKT
ECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]