Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209400105
Identifier: 209400105
GI number: 209400105
Start: 2822058
End: 2822555
Strand: Reverse
Name: 209400105
Synonym: ECH74115_3045
Alternate gene names: NA
Gene position: 2822555-2822058 (Counterclockwise)
Preceding gene: 209395940
Following gene: 209396666
Centisome position: 50.66
GC content: 58.43
Gene sequence:
>498_bases ATGCCGGTAATTAACACGCATCAGAATATCGCCGCCTTTCTCGACATGCTGGCCGTGTCCGAAGGGACGGCGAATCATCC GCTGACGAAAAACCGGGGCTATGACGTGATAGTCACCGGACTGGACGGAAAGCCGGAAATTTTCACCGACTACAGTGACC ACCCGTTCGCGCATGGCCGACCGGCGAAGGTGTTTAACCGTCGCGGTGAAAAATCCACGGCCTCCGGTCGCTATCAGCAG CTTTACCTGTTCTGGCCGCATTACCGCAAACAGCTTGCCCTGCCGGATTTCAGTCCGTTGTCACAGGACAGGCTCGCCAT TCAGTTGATCCGCGAACGCGGTGCACTGGATGACATCCGGGCGGGACGCATTGAGCGTGCCATTTCACGCTGTCGCAATA TCTGGGCGTCCCTGCCGGGTGCCGGTTACGGTCAGCGTGAGCATTCACTGGAAAAACTGGTCACCGTCTGGCGTACCGCT GGCGGCGTACCGGCTTAA
Upstream 100 bases:
>100_bases TGCCTGCGGTGTGCGGTATCGGCTCCATGCTGGGTATCGCCGGTTATCAGGTGATTGAGATTGCCATTCAGCGCCGCTTT AAGGGCAGGGGGAAACCGTA
Downstream 100 bases:
>100_bases ACGGAGTAAACACCATGAAGAAATTATCCCTTTCACTGATGCTGCACGTGTCGCTGGCGCTGATGCTGGCACTGTCCCTG ATTTATCCGCAGAGCGTGGC
Product: phage lysozyme
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Endolysin; Glycoside Hydrolase Family; Bacteriophage Endolysin Protein; Phage Lysozyme; Autolysin A; Muramidase; Prophage Endolysin Control Of Lysis; Lysozyme-Like; Muramidase-Like; Bacteriophage Endolysin; Phage Lysin; Endolysin/Phage Lysozyme
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPVINTHQNIAAFLDMLAVSEGTANHPLTKNRGYDVIVTGLDGKPEIFTDYSDHPFAHGRPAKVFNRRGEKSTASGRYQQ LYLFWPHYRKQLALPDFSPLSQDRLAIQLIRERGALDDIRAGRIERAISRCRNIWASLPGAGYGQREHSLEKLVTVWRTA GGVPA
Sequences:
>Translated_165_residues MPVINTHQNIAAFLDMLAVSEGTANHPLTKNRGYDVIVTGLDGKPEIFTDYSDHPFAHGRPAKVFNRRGEKSTASGRYQQ LYLFWPHYRKQLALPDFSPLSQDRLAIQLIRERGALDDIRAGRIERAISRCRNIWASLPGAGYGQREHSLEKLVTVWRTA GGVPA >Mature_164_residues PVINTHQNIAAFLDMLAVSEGTANHPLTKNRGYDVIVTGLDGKPEIFTDYSDHPFAHGRPAKVFNRRGEKSTASGRYQQL YLFWPHYRKQLALPDFSPLSQDRLAIQLIRERGALDDIRAGRIERAISRCRNIWASLPGAGYGQREHSLEKLVTVWRTAG GVPA
Specific function: Unknown
COG id: COG4678
COG function: function code G; Muramidase (phage lambda lysozyme)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18538; Mature: 18407
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVINTHQNIAAFLDMLAVSEGTANHPLTKNRGYDVIVTGLDGKPEIFTDYSDHPFAHGR CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCC PAKVFNRRGEKSTASGRYQQLYLFWPHYRKQLALPDFSPLSQDRLAIQLIRERGALDDIR HHHHHHCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHH AGRIERAISRCRNIWASLPGAGYGQREHSLEKLVTVWRTAGGVPA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PVINTHQNIAAFLDMLAVSEGTANHPLTKNRGYDVIVTGLDGKPEIFTDYSDHPFAHGR CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCCCCC PAKVFNRRGEKSTASGRYQQLYLFWPHYRKQLALPDFSPLSQDRLAIQLIRERGALDDIR HHHHHHCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHH AGRIERAISRCRNIWASLPGAGYGQREHSLEKLVTVWRTAGGVPA HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA