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The map label for this gene is yicJ [H]

Identifier: 209400085

GI number: 209400085

Start: 4592055

End: 4593455

Strand: Direct

Name: yicJ [H]

Synonym: ECH74115_4951

Alternate gene names: 209400085

Gene position: 4592055-4593455 (Clockwise)

Preceding gene: 209398430

Following gene: 209399472

Centisome position: 82.41

GC content: 54.46

Gene sequence:

>1401_bases
ATGACCTCTACACCGATTACTACCGCTGATATCGCTAAAGGTAAAATTGACGATGCGTTATCTGTACGGGAAAAAATAGG
CTACGGCCTGGGTGACGCAGGCGGCACCGTAATAACTTGCCTGATCATGAATTTTCTCACCTTTTTCTACACCGACGTTT
TTGGATTAACTCCGGCGCTGGTTGGCACGCTGTTTATTGCACTGCGCGTGTTTGATGCCATCTCCGACCCGGTGATGGGC
GTCATTGCCGACCGGACGCAAAGCCGATGGGGGCGCTTTCGTCCGTGGCAGCTATGGATTGCCATTCCCATCGGCATTAT
CGGCATCCTGACGTTCACCGTGCCAGATGCCAGCATGGGAGTAAAAATCGCCTGGGCGTTCGGTACTTACCTGCTCCTTT
CAGTCGGTTATACCGCCATCAACGTACCGTACTGCGCGCGGATCAACACCATGACCACCCGCCACAATGAAGTGATCTCC
TGCCAGTCCTGGCGATTCGTTCTCTGCGGCGTAGCGGGATTTCTGGTTTCGGTAGGCTTACCGTGGATGGTAGCTCTCTT
CGGTCAGGGCAACGCTGCACGCGGCTATCAACTGGGCGTCGGGGTATTGTGCGCCATTGCCGTGGTGATGTTCCTGTGCT
GTTTCTTCTGGGTTCGTGAACGGGTGCCGCTCTCCACAATGGGGAAATTTACCCTGCGCGAACATCTTGCCGGGCTGCGG
AACAACGACCAACTGCTGCTGATGCTGGTCATGTCTTTCCTGCTGATTAACGTCTTTAACATTCGCGGCGGTGGGTATAT
GTACTTCATTACCTACGTCTTACAAGGCAGCACGGGCTACACGTCGCTGTTCTTCACCATGGTCACCTTCGCCTCCATTA
TCGGCTCGGTGATTGTCAGCCCGTTAACGCGGCGTTTCGATACCGTCAAAATTTATTACTACACCAACCTGCTCCTCGCT
GCACTGGCGGTGTTGATGTGGTTCCTGCCCTCCGGCCCGGCTTATCAAACGCTGTGGCTGGCGGTGATCCTCGGTAATGG
CGTGATTCTTGGCTTCACATTGCCACTGCACTTCTCATTGATGGCCTTTGCCGATGACTACGGCGAGTGGAAAACCCACG
TACGTTCTTCCGGCATGAACTTCGCCTTCAATCTGTTTTTCATCAAGCTGGCCTGGGCCTCCAGCGCCGGGATCATCAGC
CTGCTGTTTATTTTTGTCGCCTACCAGCCTGGCGTGGAAAACCAGACCGCCAGTTCGCTTGGCGGGATCGCGGCGATGGA
AACATTACTGCCTGCGCTATTCCACCTGCTGCTGGCAGGGGCGATCCGCTTTTGCAAACTCAATAATCCTATGATGTCAC
GCATAGCTACCGACCTGCGTCAGCGTCATGTACAGCCTTAA

Upstream 100 bases:

>100_bases
TTTACTCTTTTCTCGCCTTGTTGATATTCCCGTTCACGGCAGAATTAATCAGGTCATTTCAATAAAACTAAAAATTGCTC
CCTATTCACGAGGAATATCT

Downstream 100 bases:

>100_bases
GGAGCACAAGATGAACATTTCGGAAGTCGATCTGCATAAACTGACGGTCAGCGATCCGTTCCTCGGTCAGTACCAACAAC
TGGTCCGCGACGTGGTGATT

Product: sugar transporter, glycoside-pentoside-hexuronide family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 465

Protein sequence:

>466_residues
MTSTPITTADIAKGKIDDALSVREKIGYGLGDAGGTVITCLIMNFLTFFYTDVFGLTPALVGTLFIALRVFDAISDPVMG
VIADRTQSRWGRFRPWQLWIAIPIGIIGILTFTVPDASMGVKIAWAFGTYLLLSVGYTAINVPYCARINTMTTRHNEVIS
CQSWRFVLCGVAGFLVSVGLPWMVALFGQGNAARGYQLGVGVLCAIAVVMFLCCFFWVRERVPLSTMGKFTLREHLAGLR
NNDQLLLMLVMSFLLINVFNIRGGGYMYFITYVLQGSTGYTSLFFTMVTFASIIGSVIVSPLTRRFDTVKIYYYTNLLLA
ALAVLMWFLPSGPAYQTLWLAVILGNGVILGFTLPLHFSLMAFADDYGEWKTHVRSSGMNFAFNLFFIKLAWASSAGIIS
LLFIFVAYQPGVENQTASSLGGIAAMETLLPALFHLLLAGAIRFCKLNNPMMSRIATDLRQRHVQP

Sequences:

>Translated_466_residues
MTSTPITTADIAKGKIDDALSVREKIGYGLGDAGGTVITCLIMNFLTFFYTDVFGLTPALVGTLFIALRVFDAISDPVMG
VIADRTQSRWGRFRPWQLWIAIPIGIIGILTFTVPDASMGVKIAWAFGTYLLLSVGYTAINVPYCARINTMTTRHNEVIS
CQSWRFVLCGVAGFLVSVGLPWMVALFGQGNAARGYQLGVGVLCAIAVVMFLCCFFWVRERVPLSTMGKFTLREHLAGLR
NNDQLLLMLVMSFLLINVFNIRGGGYMYFITYVLQGSTGYTSLFFTMVTFASIIGSVIVSPLTRRFDTVKIYYYTNLLLA
ALAVLMWFLPSGPAYQTLWLAVILGNGVILGFTLPLHFSLMAFADDYGEWKTHVRSSGMNFAFNLFFIKLAWASSAGIIS
LLFIFVAYQPGVENQTASSLGGIAAMETLLPALFHLLLAGAIRFCKLNNPMMSRIATDLRQRHVQP
>Mature_465_residues
TSTPITTADIAKGKIDDALSVREKIGYGLGDAGGTVITCLIMNFLTFFYTDVFGLTPALVGTLFIALRVFDAISDPVMGV
IADRTQSRWGRFRPWQLWIAIPIGIIGILTFTVPDASMGVKIAWAFGTYLLLSVGYTAINVPYCARINTMTTRHNEVISC
QSWRFVLCGVAGFLVSVGLPWMVALFGQGNAARGYQLGVGVLCAIAVVMFLCCFFWVRERVPLSTMGKFTLREHLAGLRN
NDQLLLMLVMSFLLINVFNIRGGGYMYFITYVLQGSTGYTSLFFTMVTFASIIGSVIVSPLTRRFDTVKIYYYTNLLLAA
LAVLMWFLPSGPAYQTLWLAVILGNGVILGFTLPLHFSLMAFADDYGEWKTHVRSSGMNFAFNLFFIKLAWASSAGIISL
LFIFVAYQPGVENQTASSLGGIAAMETLLPALFHLLLAGAIRFCKLNNPMMSRIATDLRQRHVQP

Specific function: Unknown

COG id: COG2211

COG function: function code G; Na+/melibiose symporter and related transporters

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:galactoside symporter (TC 2.A.2) family [H]

Homologues:

Organism=Escherichia coli, GI87082306, Length=449, Percent_Identity=37.4164810690423, Blast_Score=277, Evalue=1e-75,
Organism=Escherichia coli, GI1786466, Length=452, Percent_Identity=32.0796460176991, Blast_Score=222, Evalue=4e-59,
Organism=Escherichia coli, GI1790561, Length=460, Percent_Identity=30, Blast_Score=155, Evalue=6e-39,
Organism=Escherichia coli, GI48994989, Length=450, Percent_Identity=24.2222222222222, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787902, Length=464, Percent_Identity=28.0172413793103, Blast_Score=125, Evalue=5e-30,
Organism=Escherichia coli, GI145693206, Length=466, Percent_Identity=25.1072961373391, Blast_Score=122, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016196
- InterPro:   IPR001927
- InterPro:   IPR018043 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51388; Mature: 51256

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTPITTADIAKGKIDDALSVREKIGYGLGDAGGTVITCLIMNFLTFFYTDVFGLTPAL
CCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTLFIALRVFDAISDPVMGVIADRTQSRWGRFRPWQLWIAIPIGIIGILTFTVPDASMG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCC
VKIAWAFGTYLLLSVGYTAINVPYCARINTMTTRHNEVISCQSWRFVLCGVAGFLVSVGL
EEEEHHHHHHHHHHHCHHHCCCCHHEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHCH
PWMVALFGQGNAARGYQLGVGVLCAIAVVMFLCCFFWVRERVPLSTMGKFTLREHLAGLR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
NNDQLLLMLVMSFLLINVFNIRGGGYMYFITYVLQGSTGYTSLFFTMVTFASIIGSVIVS
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHH
PLTRRFDTVKIYYYTNLLLAALAVLMWFLPSGPAYQTLWLAVILGNGVILGFTLPLHFSL
HHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHH
MAFADDYGEWKTHVRSSGMNFAFNLFFIKLAWASSAGIISLLFIFVAYQPGVENQTASSL
HHHHHHHHHHHHHHHHCCCCCEEHEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHH
GGIAAMETLLPALFHLLLAGAIRFCKLNNPMMSRIATDLRQRHVQP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TSTPITTADIAKGKIDDALSVREKIGYGLGDAGGTVITCLIMNFLTFFYTDVFGLTPAL
CCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VGTLFIALRVFDAISDPVMGVIADRTQSRWGRFRPWQLWIAIPIGIIGILTFTVPDASMG
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCC
VKIAWAFGTYLLLSVGYTAINVPYCARINTMTTRHNEVISCQSWRFVLCGVAGFLVSVGL
EEEEHHHHHHHHHHHCHHHCCCCHHEEECCCCCCCCCEEECCCHHHHHHHHHHHHHHHCH
PWMVALFGQGNAARGYQLGVGVLCAIAVVMFLCCFFWVRERVPLSTMGKFTLREHLAGLR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
NNDQLLLMLVMSFLLINVFNIRGGGYMYFITYVLQGSTGYTSLFFTMVTFASIIGSVIVS
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHH
PLTRRFDTVKIYYYTNLLLAALAVLMWFLPSGPAYQTLWLAVILGNGVILGFTLPLHFSL
HHHHCCCEEEEEHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHH
MAFADDYGEWKTHVRSSGMNFAFNLFFIKLAWASSAGIISLLFIFVAYQPGVENQTASSL
HHHHHHHHHHHHHHHHCCCCCEEHEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHH
GGIAAMETLLPALFHLLLAGAIRFCKLNNPMMSRIATDLRQRHVQP
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]