| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is artJ [H]
Identifier: 209400027
GI number: 209400027
Start: 1031804
End: 1032535
Strand: Reverse
Name: artJ [H]
Synonym: ECH74115_1019
Alternate gene names: 209400027
Gene position: 1032535-1031804 (Counterclockwise)
Preceding gene: 209396948
Following gene: 209398497
Centisome position: 18.53
GC content: 46.86
Gene sequence:
>732_bases ATGAAAAAGTTAGTTCTTGCCGCATTACTGGCATCCTGTGCGTTCGGCGCTTCTGCCGCAGAGAAAATCAATTTTGGCGT ATCAGCGACCTATCCGCCGTTCGAGTCGATGGATGCCAATAACCAGATCGTCGGCTTTGATATCGACCTAGCAAAAGCGT TATGCAAACAGATGCAGGCAGAATGTACTTTTACCAATCACGCGTTCGACAGCCTGATCCCGTCACTGAAATTCAGGAAA TATGACGCCGTAATCTCCGGTATGGATATCACACCAGATCGTAGCAAGCAGGTATCGTTCACCACGCCCTATTACGAAAA CTCAGCCGTCGTGATTGCCAAAAAAGATACCTACAAAACGTTTGCCGACCTGAAAGGCAAACGCATTGGGATGGAAAACG GTACTACGCACCAGAAATATATTCAGGATCAGCACCCGGAAGTGAAAACGGTCTCCTATGACAGTTATCAAAATGCCTTT ATCGATCTGAAAAATAGCCGTATTGATGGCGTATTTGGTGACACTGCGGTGGTTAATGAATGGCTGAAAACCAATCCGCA ACTGGGCGTTGCTACTGAAAAAGTGACCGATCCGCAATACTTTGGCACCGGTCTGGGTATCGCTGTACGTCCGGATAACA AAGCTCTGCTGGAAAAACTGAATAACGCGCTGGCAGCAATTAAAGCTGACGGTACATATCAACAAATCAGCGATCAGTGG TTCCCGCAATAA
Upstream 100 bases:
>100_bases TTTAATCATATTTATTGCATATAAATTCACTTGATGGCATTGTTATCCCATGCCGCAGACACGGCCAATAATCATAAGAT TGACAGACGGGAGTTCCATC
Downstream 100 bases:
>100_bases TTATTCATTTGCCGGAGTGGGCGAACACCCACTCCGGCAAAATCACTTCTCTACGCTAATCCCAGGCGCTGAAACTGCTC TGGCGGCGCATCATTATCTT
Product: arginine ABC transporter, periplasmic arginine-binding protein ArtJ
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESMDANNQIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK YDAVISGMDITPDRSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF IDLKNSRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQQISDQW FPQ
Sequences:
>Translated_243_residues MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESMDANNQIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK YDAVISGMDITPDRSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF IDLKNSRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQQISDQW FPQ >Mature_243_residues MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESMDANNQIVGFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRK YDAVISGMDITPDRSKQVSFTTPYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF IDLKNSRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQQISDQW FPQ
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=243, Percent_Identity=96.7078189300412, Blast_Score=489, Evalue=1e-140, Organism=Escherichia coli, GI1787088, Length=241, Percent_Identity=63.9004149377593, Blast_Score=339, Evalue=9e-95, Organism=Escherichia coli, GI1788648, Length=229, Percent_Identity=38.8646288209607, Blast_Score=165, Evalue=2e-42, Organism=Escherichia coli, GI1788649, Length=253, Percent_Identity=35.5731225296443, Blast_Score=158, Evalue=3e-40, Organism=Escherichia coli, GI1788228, Length=220, Percent_Identity=31.8181818181818, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1787031, Length=244, Percent_Identity=29.0983606557377, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26847; Mature: 26847
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESMDANNQIVGFDIDLAKALCKQMQA CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPDRSKQVSFTTPYYENSAVVIAKKDTYKT CCEECHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHH FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNSRIDGVFGDTAVVNE HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCCCCCHHHHHH WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQQISDQW HHHCCCCCCCEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHEEEECCCCHHHHHHHC FPQ CCC >Mature Secondary Structure MKKLVLAALLASCAFGASAAEKINFGVSATYPPFESMDANNQIVGFDIDLAKALCKQMQA CHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHH ECTFTNHAFDSLIPSLKFRKYDAVISGMDITPDRSKQVSFTTPYYENSAVVIAKKDTYKT CCEECHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEECCCCCCCEEEEEECCCHHH FADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAFIDLKNSRIDGVFGDTAVVNE HHHCCCCEECCCCCCCHHHHHHCCCCCEEEEECCCCCCEEEEECCCEECCCCCCHHHHHH WLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQQISDQW HHHCCCCCCCEECCCCCCHHHCCCCEEEECCCCHHHHHHHHHHHEEEECCCCHHHHHHHC FPQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]