Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209400016
Identifier: 209400016
GI number: 209400016
Start: 2824399
End: 2825472
Strand: Reverse
Name: 209400016
Synonym: ECH74115_3050
Alternate gene names: NA
Gene position: 2825472-2824399 (Counterclockwise)
Preceding gene: 209400856
Following gene: 209400740
Centisome position: 50.71
GC content: 54.84
Gene sequence:
>1074_bases ATGCGCCAGGAAACCCGCTTTAAATTTAATGCCTACCTGTCCCGTGTTGCCGAACTGAACGGCATCGACGCCGGTGATGT GTCGAAAAAATTCACCGTTGAACCGTCGGTCACCCAGACCCTGATGAACACCATGCAGGAGTCCTCTGACTTTCTGACCC GCATCAACATTGTGCCGGTCAGCGAAATGAAAGGGGAAAAAATTGGTATTGGTGTCACCGGCTCCATCGCCAGCACCACA GACACCGCCGGTGGCACCGAGCGTCAGCCGAAGGACTTCTCGAAGCTGGCGTCAAACAAGTACGAATGCGACCAGATTAA CTTCGATTTTTATATCCGCTACAAAACGCTTGACCTGTGGGCGCGTTATCAGGATTTCCAGCTCCGTGTCCGTAACGCCA TTATCAAACGCCAGTCCCTTGATTTAATCATGGCCGGTTTTAACGGCGTGAGGCGTGCCGAAACCTCTGACCGCAGCAGT AACCAGATGCTGCAGGATGTGGCGGTCGGCTGGCTGCAGAAATACCGCAATGAAGCCCCGGCGCGCGTGATGAGCAAGGT TACTGACGAGGAAGGTCACACGACCTCTGAGGTCATCCGCGTGGGTAAGGGCGGTGATTATGCCAGCCTCGATGCACTGG TGATGGATGCGACCAACAACCTGATTGAGCCGTGGTATCAGGAAGACCCTGACCTTGTGGTGATTGTGGGGCGTCAGCTG CTGGCGGACAAGTATTTTCCCATCGTCAACAGGGAGCAGGACAACAGCGAGATGCTGGCCGCTGACGTCATCATCAGCCA GAAACGCATCGGTAACCTGCCGGCGGTACGCGTCCCGTACTTCCCGGCGGATGCGATGCTCATCACGAAGCTGGAAAACC TGTCCATCTACTACATGGATGACAGCCATCGCCGCGTGATTGTGGAAAACCCGAAACTCGACCGCGTGGAGAACTACGAG TCAATGAACATTGATTACGTGGTGGAAGACTACGCCGCCGGTTGTCTGGTGGAAAAAATTAAGGTCGGTGACTTCTCCAC ACCGACTAAAGTGACCGCAGAGCCGGGAGCGTAA
Upstream 100 bases:
>100_bases GCCACCGGCGGTGGCGGTGACGCCCTGATGACGAACTGCTGACCGGCGTCAGCCAGTCCGGGAAAACCTTCACGATTAAC CCTTAATTTCAGGAAAAACT
Downstream 100 bases:
>100_bases CCGATGACGAGTCCCGCACAGCGCCACATGATGCGGGTCTCGGCAGCGATGACCGCGCAGCGGGACGCCGCCCCGCTGCG ACATGCAACTGTCTATGAGC
Product: phage major capsid protein GpN
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Phage Capsid Protein; Capsid Proteins; Phage Capsid Protein; Capsid; Phage Gene; Bacteriophage Capsid Protein N; Phage-Related Capsid Completion Protein; Capsid-Like Protein; Capsid Protein Phage Origin; Bacteriophage Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Phage Capsid Protein N; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Phage-Related Capsid Protein; Prophage Capsid Protein; Bacteriophage Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Phage Protein; Phage Capsid Family
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNTMQESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTT DTAGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLWARYQDFQLRVRNAIIKRQSLDLIMAGFNGVRRAETSDRSS NQMLQDVAVGWLQKYRNEAPARVMSKVTDEEGHTTSEVIRVGKGGDYASLDALVMDATNNLIEPWYQEDPDLVVIVGRQL LADKYFPIVNREQDNSEMLAADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYMDDSHRRVIVENPKLDRVENYE SMNIDYVVEDYAAGCLVEKIKVGDFSTPTKVTAEPGA
Sequences:
>Translated_357_residues MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNTMQESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTT DTAGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLWARYQDFQLRVRNAIIKRQSLDLIMAGFNGVRRAETSDRSS NQMLQDVAVGWLQKYRNEAPARVMSKVTDEEGHTTSEVIRVGKGGDYASLDALVMDATNNLIEPWYQEDPDLVVIVGRQL LADKYFPIVNREQDNSEMLAADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYMDDSHRRVIVENPKLDRVENYE SMNIDYVVEDYAAGCLVEKIKVGDFSTPTKVTAEPGA >Mature_357_residues MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNTMQESSDFLTRINIVPVSEMKGEKIGIGVTGSIASTT DTAGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLWARYQDFQLRVRNAIIKRQSLDLIMAGFNGVRRAETSDRSS NQMLQDVAVGWLQKYRNEAPARVMSKVTDEEGHTTSEVIRVGKGGDYASLDALVMDATNNLIEPWYQEDPDLVVIVGRQL LADKYFPIVNREQDNSEMLAADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYMDDSHRRVIVENPKLDRVENYE SMNIDYVVEDYAAGCLVEKIKVGDFSTPTKVTAEPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40295; Mature: 40295
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNTMQESSDFLTRINIVPV CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEEEH SEMKGEKIGIGVTGSIASTTDTAGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLW HHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECEEEEEEEEEEEHH ARYQDFQLRVRNAIIKRQSLDLIMAGFNGVRRAETSDRSSNQMLQDVAVGWLQKYRNEAP HHHHHHHHHHHHHHHHHHHHHEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH ARVMSKVTDEEGHTTSEVIRVGKGGDYASLDALVMDATNNLIEPWYQEDPDLVVIVGRQL HHHHHHHCCCCCCCHHHHEEECCCCCCHHHHHEEEECCCHHCCCHHCCCCCEEEEECHHH LADKYFPIVNREQDNSEMLAADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYMD HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEECCEEEEEE DSHRRVIVENPKLDRVENYESMNIDYVVEDYAAGCLVEKIKVGDFSTPTKVTAEPGA CCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHCCHHEEEEECCCCCCCCEEECCCCC >Mature Secondary Structure MRQETRFKFNAYLSRVAELNGIDAGDVSKKFTVEPSVTQTLMNTMQESSDFLTRINIVPV CCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCEEEEEEEEH SEMKGEKIGIGVTGSIASTTDTAGGTERQPKDFSKLASNKYECDQINFDFYIRYKTLDLW HHCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEECEEEEEEEEEEEHH ARYQDFQLRVRNAIIKRQSLDLIMAGFNGVRRAETSDRSSNQMLQDVAVGWLQKYRNEAP HHHHHHHHHHHHHHHHHHHHHEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCH ARVMSKVTDEEGHTTSEVIRVGKGGDYASLDALVMDATNNLIEPWYQEDPDLVVIVGRQL HHHHHHHCCCCCCCHHHHEEECCCCCCHHHHHEEEECCCHHCCCHHCCCCCEEEEECHHH LADKYFPIVNREQDNSEMLAADVIISQKRIGNLPAVRVPYFPADAMLITKLENLSIYYMD HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEEECCEEEEEE DSHRRVIVENPKLDRVENYESMNIDYVVEDYAAGCLVEKIKVGDFSTPTKVTAEPGA CCCCEEEEECCCCCCCCCCCCCCEEEEEHHHHCCHHEEEEECCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA