| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is eprI [H]
Identifier: 209399756
GI number: 209399756
Start: 3824684
End: 3824923
Strand: Reverse
Name: eprI [H]
Synonym: ECH74115_4133
Alternate gene names: 209399756
Gene position: 3824923-3824684 (Counterclockwise)
Preceding gene: 209396063
Following gene: 209399138
Centisome position: 68.64
GC content: 39.17
Gene sequence:
>240_bases ATGGCAGATTGGAATGGTTATATTATGGACATCAGCAAACAATTTGATCAGGGCGTTGATGATCTGAACCAGCAAGTTGA AAAAGCGTTGGAGGATTTAGCAACCAATCCTTCCGACCCGAAATTCCTTGCCGAATATCAAAGTGCATTAGCTGAGTATA CATTATATCGAAATGCGCAATCTAACGTTGTAAAAGCGTATAAAGATCTTGATTCGGCAATCATACAAAACTTCCGCTAA
Upstream 100 bases:
>100_bases AATCAGGACACAAATAATAGTTCATTTAGCTACGGAGATAACCGATTCGAGAAGTCTCAAGGTAGCAAGTGGACATTTCA GGAATAATTGAGGAGGACTT
Downstream 100 bases:
>100_bases ACTGGATAAGGATTTTATTATGTCAGTAAGCAATATGCCACCTATTGATAGAGCTGAGCAATCAACTGCTCATGAAATAC AGCAAGCGAAAGTGATTGAT
Product: type III secretion apparatus needle protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MADWNGYIMDISKQFDQGVDDLNQQVEKALEDLATNPSDPKFLAEYQSALAEYTLYRNAQSNVVKAYKDLDSAIIQNFR
Sequences:
>Translated_79_residues MADWNGYIMDISKQFDQGVDDLNQQVEKALEDLATNPSDPKFLAEYQSALAEYTLYRNAQSNVVKAYKDLDSAIIQNFR >Mature_78_residues ADWNGYIMDISKQFDQGVDDLNQQVEKALEDLATNPSDPKFLAEYQSALAEYTLYRNAQSNVVKAYKDLDSAIIQNFR
Specific function: Required for invasion of epithelial cells [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mxiH/prgI/yscF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021123 - InterPro: IPR011841 [H]
Pfam domain/function: PF09392 MxiH [H]
EC number: NA
Molecular weight: Translated: 9038; Mature: 8907
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADWNGYIMDISKQFDQGVDDLNQQVEKALEDLATNPSDPKFLAEYQSALAEYTLYRNAQ CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCH SNVVKAYKDLDSAIIQNFR HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ADWNGYIMDISKQFDQGVDDLNQQVEKALEDLATNPSDPKFLAEYQSALAEYTLYRNAQ CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCH SNVVKAYKDLDSAIIQNFR HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7476203; 11677609 [H]