Click here to switch to the map view.

The map label for this gene is 209399715

Identifier: 209399715

GI number: 209399715

Start: 248953

End: 250365

Strand: Reverse

Name: 209399715

Synonym: ECH74115_0235

Alternate gene names: NA

Gene position: 250365-248953 (Counterclockwise)

Preceding gene: 209400989

Following gene: 209395773

Centisome position: 4.49

GC content: 56.9

Gene sequence:

>1413_bases
ATGGCAATGGACTTACGCGATCCGAATGTCTGGATATCGCACCTGCTGGAAAACCTGCCGGAAGAAAAACTGGCATCGGC
GCTGAAAGATGACAACCCGGACTGGGAGTATATCGACGGCGAAATCGTCAAGCTGGGGTCTCTGGCCCACGCTCAGCTTG
ATATTCCCGAACTACAACGCAGGGGGCTACAGCTTCTGGCTTCTGAAAGCAAAGACTTCAGGCTACTGGCACACCTGCTC
AGAACCCTGCAACATGCCGGTGATCCACTGCTGGCACTGCACCTGCTAACGCTATACGTGGAACATTACTGGACTGTGGC
CGCGCCGCAGAATATGGCGCATAAAAAACGCTTTGCCAGCCAGATCATTAAACGTTTTGAAACGGGTATTGAAGGCTTTT
CACAAAACGCTGCCACAACGCAGCGCGATACTCTGCTGGGTGAGCTGGCGAAACTGGCGCAGTGCTGGCAGTCACATAAC
GTCCCGGAACTGGCACAGGCTACCGATGATCTTTTTGCCCTGTACCAGCGTACGTTTAATCGTGCGGCTCCTGCTCCGGT
CCCCACTCCGGCGGCCTCCGGTAGTTCACCACAAACCACCGTCACGTCTGAAAGCGGCGTGACGCAACCCAGTGCTCCGG
CTCCCCAAATCGCCATCGACAGTCACGACGACAAAGCCTGGCGCGACACGCTGTTAAAAGTGGCGGCTATTTTATGTGAA
CGCCAGCCGGACTCGCCGCAGGGCTATCGCCTGCGCCGCCATGCCCTGTGGCAATCCATCACCAGTACACCCCAGGCGGA
AAGCGATGGACGTACCCCACTGGCTGCGGTCTCTGCCGATATGGTGGCGGATTACCAGTCCCGGCTTGCCAGCGCGGATA
TGGCGCTGTGGCAACAGGTTGAGAAAAGCGTATTGCTGGCTCCTTACTGGCTGGACGGTCACTGTCTTTCTGCACAGACG
GCACTGCGTCTGGGTTACAAACAGGTGGCAGACACCATCCGCGATGAGGTCATCCGCTTCCTTGAGCGTCTGCCCCAGCT
TACCGGGCTGCTGTTTAATGACCGCACACCGTTTCTCAGTGAGCAGACGAAACAATGGCTGGCTGCTTCGCCCGACGGCA
AAGTTGCACCGGTTGCGCAAATCGGTGAGGAATCGCAGGCAGCCAGAGCCTGTTTTGCTGGGCAGGGTCTGGAGGCGGCG
CTGCGATATCTGGACATGCTACCCGAAGGCGATCCCCGCGATCAGTTTCACCGCCAGTACCTTGCCGCACAGTTGACGGA
GGAGGCGGGGCTGATACAGCTTGCGCAGCAACAGTACCGGATGTTGTTGATGATAGGGAGTCAGATGATGGTGTCTGACT
GGGAGCCATCATTACTTACGCAGCTTGAACAAAAATTCACGGCAGAACAATAA

Upstream 100 bases:

>100_bases
GCAGATAACGCCGCAGGAAAGCTGACCTTTAACATTGACGGGCTGGCAAGGGCGATTGCCCCCCTGCGCGATGCCTGCCA
CTGGGCGGGAGAATAAAAAT

Downstream 100 bases:

>100_bases
AAGAGAACAGGAGTTTTTGTGTTCAGATTACCAACACCCCGACTACTCAGCGGACTCAAATCAGCCCTGCGACCGGCGAT
GCCCCGGTTTAAAGTCTCCG

Product: ImpA domain protein

Products: NA

Alternate protein names: ImpA Domain-Containing Protein; Protein ImpA; Type VI Secretion-Associated Protein Family; ImpA-Like; ImpA N-Terminal; ImpA-Related Domain-Containing Protein; ImpA-Like Protein

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MAMDLRDPNVWISHLLENLPEEKLASALKDDNPDWEYIDGEIVKLGSLAHAQLDIPELQRRGLQLLASESKDFRLLAHLL
RTLQHAGDPLLALHLLTLYVEHYWTVAAPQNMAHKKRFASQIIKRFETGIEGFSQNAATTQRDTLLGELAKLAQCWQSHN
VPELAQATDDLFALYQRTFNRAAPAPVPTPAASGSSPQTTVTSESGVTQPSAPAPQIAIDSHDDKAWRDTLLKVAAILCE
RQPDSPQGYRLRRHALWQSITSTPQAESDGRTPLAAVSADMVADYQSRLASADMALWQQVEKSVLLAPYWLDGHCLSAQT
ALRLGYKQVADTIRDEVIRFLERLPQLTGLLFNDRTPFLSEQTKQWLAASPDGKVAPVAQIGEESQAARACFAGQGLEAA
LRYLDMLPEGDPRDQFHRQYLAAQLTEEAGLIQLAQQQYRMLLMIGSQMMVSDWEPSLLTQLEQKFTAEQ

Sequences:

>Translated_470_residues
MAMDLRDPNVWISHLLENLPEEKLASALKDDNPDWEYIDGEIVKLGSLAHAQLDIPELQRRGLQLLASESKDFRLLAHLL
RTLQHAGDPLLALHLLTLYVEHYWTVAAPQNMAHKKRFASQIIKRFETGIEGFSQNAATTQRDTLLGELAKLAQCWQSHN
VPELAQATDDLFALYQRTFNRAAPAPVPTPAASGSSPQTTVTSESGVTQPSAPAPQIAIDSHDDKAWRDTLLKVAAILCE
RQPDSPQGYRLRRHALWQSITSTPQAESDGRTPLAAVSADMVADYQSRLASADMALWQQVEKSVLLAPYWLDGHCLSAQT
ALRLGYKQVADTIRDEVIRFLERLPQLTGLLFNDRTPFLSEQTKQWLAASPDGKVAPVAQIGEESQAARACFAGQGLEAA
LRYLDMLPEGDPRDQFHRQYLAAQLTEEAGLIQLAQQQYRMLLMIGSQMMVSDWEPSLLTQLEQKFTAEQ
>Mature_469_residues
AMDLRDPNVWISHLLENLPEEKLASALKDDNPDWEYIDGEIVKLGSLAHAQLDIPELQRRGLQLLASESKDFRLLAHLLR
TLQHAGDPLLALHLLTLYVEHYWTVAAPQNMAHKKRFASQIIKRFETGIEGFSQNAATTQRDTLLGELAKLAQCWQSHNV
PELAQATDDLFALYQRTFNRAAPAPVPTPAASGSSPQTTVTSESGVTQPSAPAPQIAIDSHDDKAWRDTLLKVAAILCER
QPDSPQGYRLRRHALWQSITSTPQAESDGRTPLAAVSADMVADYQSRLASADMALWQQVEKSVLLAPYWLDGHCLSAQTA
LRLGYKQVADTIRDEVIRFLERLPQLTGLLFNDRTPFLSEQTKQWLAASPDGKVAPVAQIGEESQAARACFAGQGLEAAL
RYLDMLPEGDPRDQFHRQYLAAQLTEEAGLIQLAQQQYRMLLMIGSQMMVSDWEPSLLTQLEQKFTAEQ

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52391; Mature: 52260

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMDLRDPNVWISHLLENLPEEKLASALKDDNPDWEYIDGEIVKLGSLAHAQLDIPELQR
CCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCEECCCHHHHHCCHHHHCCCCHHHHH
RGLQLLASESKDFRLLAHLLRTLQHAGDPLLALHLLTLYVEHYWTVAAPQNMAHKKRFAS
HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QIIKRFETGIEGFSQNAATTQRDTLLGELAKLAQCWQSHNVPELAQATDDLFALYQRTFN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RAAPAPVPTPAASGSSPQTTVTSESGVTQPSAPAPQIAIDSHDDKAWRDTLLKVAAILCE
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
RQPDSPQGYRLRRHALWQSITSTPQAESDGRTPLAAVSADMVADYQSRLASADMALWQQV
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKSVLLAPYWLDGHCLSAQTALRLGYKQVADTIRDEVIRFLERLPQLTGLLFNDRTPFLS
HHHHEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EQTKQWLAASPDGKVAPVAQIGEESQAARACFAGQGLEAALRYLDMLPEGDPRDQFHRQY
HHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHH
LAAQLTEEAGLIQLAQQQYRMLLMIGSQMMVSDWEPSLLTQLEQKFTAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AMDLRDPNVWISHLLENLPEEKLASALKDDNPDWEYIDGEIVKLGSLAHAQLDIPELQR
CCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCEECCCHHHHHCCHHHHCCCCHHHHH
RGLQLLASESKDFRLLAHLLRTLQHAGDPLLALHLLTLYVEHYWTVAAPQNMAHKKRFAS
HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QIIKRFETGIEGFSQNAATTQRDTLLGELAKLAQCWQSHNVPELAQATDDLFALYQRTFN
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RAAPAPVPTPAASGSSPQTTVTSESGVTQPSAPAPQIAIDSHDDKAWRDTLLKVAAILCE
CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHH
RQPDSPQGYRLRRHALWQSITSTPQAESDGRTPLAAVSADMVADYQSRLASADMALWQQV
CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKSVLLAPYWLDGHCLSAQTALRLGYKQVADTIRDEVIRFLERLPQLTGLLFNDRTPFLS
HHHHEECCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
EQTKQWLAASPDGKVAPVAQIGEESQAARACFAGQGLEAALRYLDMLPEGDPRDQFHRQY
HHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHH
LAAQLTEEAGLIQLAQQQYRMLLMIGSQMMVSDWEPSLLTQLEQKFTAEQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA