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The map label for this gene is cse3 [C]

Identifier: 209399506

GI number: 209399506

Start: 3704138

End: 3704788

Strand: Reverse

Name: cse3 [C]

Synonym: ECH74115_4009

Alternate gene names: 209399506

Gene position: 3704788-3704138 (Counterclockwise)

Preceding gene: 209396791

Following gene: 209397933

Centisome position: 66.49

GC content: 55.61

Gene sequence:

>651_bases
ATGTACCTCTCAAGAATAACCTTACATACCGGCCAGCTTTCGCCTGCGCAGTTGCTGCATTTGGTGGATCGCGGGGAATA
TGTGATGCATCAGTGGCTGTGGGATCTCTTCCCTGGCGGCAAAGAAAGGCAATTTCTTTATCGTCGGGAAGAACTCCAGG
GCGCGTTTCGCTTTTTTGTACTGTCGCAGGAACGCCCGGCGGAAAGTGAAACGTTCACCATCGAATGCCGGTCATTTGTG
CCCGAGCTGCGTACCGGACAACAACTTTGTTTCAACCTGCGGGCGAATCCAACAATCTGTAAAGCGGGCAAGCGCCACGA
TCTGCTGATGGAGGCGAAACGGCAGGTGAGGGGGCAGGCGGAAGGAAGTGATGTCTGGTTGCATCAACAACAGGCGGCGC
TGGACTGGCTGGCAGCGCAGGGGGAGAGAAGCGGTTTTACACTGCTGGATACCTCGGTTGATGCCTACCGACAACAGCAA
CTGCGGCGGGAAAACTCCCGGCAACTGATCCAGTTCAGTAGCGTGGATTATACGGGGATGCTTACGGTCACCGATCCCGG
GTTATTTCTGCAACGTCTCAGTCAGGGGTATGGCAAAAGCCGCGCGTTCGGCTGTGGTCTGATGCTGATCAAACCCGGAG
CAGAGGTGTGA

Upstream 100 bases:

>100_bases
GCAAAATATTACGTCGCCGGGATGTTCCTTTAAATCGTCAGCAGTGGCTGTTTGGGGAACGCACCATCAATCAGGGGCCG
TGGCTCAGCAAGGAGGAACC

Downstream 100 bases:

>100_bases
CGTTTGTACCACTGAGTCCGATCCCGTTAAAAGATCGCACCTCTATGATCTTCCTCCAGTACGGTCAAATCGACGTACTG
GACGGCGCTTTCGTGCTGAT

Product: CRISPR-associated protein, Cse3 family

Products: NA

Alternate protein names: CRISPR-Associated Cse3 Family Protein; Cse3 Family CRISPR-Associated Protein; Cytoplasmic Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Cse3 Family Protein; CRISPR-Associated Protein CT

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFV
PELRTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEV

Sequences:

>Translated_216_residues
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFV
PELRTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEV
>Mature_216_residues
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFVLSQERPAESETFTIECRSFV
PELRTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQ
LRRENSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24817; Mature: 24817

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFV
CCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEE
LSQERPAESETFTIECRSFVPELRTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQA
ECCCCCCCCCEEEEEHHHHCCCCCCCHHHEEECCCCCCEECCCCCHHHHHHHHHHHCCCC
EGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGM
CCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHEEEECCCCEEEE
LTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEV
EEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPGGKERQFLYRREELQGAFRFFV
CCEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEE
LSQERPAESETFTIECRSFVPELRTGQQLCFNLRANPTICKAGKRHDLLMEAKRQVRGQA
ECCCCCCCCCEEEEEHHHHCCCCCCCHHHEEECCCCCCEECCCCCHHHHHHHHHHHCCCC
EGSDVWLHQQQAALDWLAAQGERSGFTLLDTSVDAYRQQQLRRENSRQLIQFSSVDYTGM
CCCEEEEEHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHEEEECCCCEEEE
LTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEV
EEEECHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA