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The map label for this gene is epaR [H]

Identifier: 209399341

GI number: 209399341

Start: 4719391

End: 4720167

Strand: Reverse

Name: epaR [H]

Synonym: ECH74115_5073

Alternate gene names: 209399341

Gene position: 4720167-4719391 (Counterclockwise)

Preceding gene: 209400714

Following gene: 209398003

Centisome position: 84.71

GC content: 33.46

Gene sequence:

>777_bases
ATGAATGAGATAATGACGGTCATAGTATCATCATTTTATTGTATACTCAGGCCGCTGGGGATGTTTATTATCCTACCAAT
ATTTTCAACAGGTGTTTTACTCAGTAACTTTATTCGCAACTCAATTATGATTGCGTTTACGCTTCCGATCATAGTAGAGA
ACTATACATTTTCGGAAAAATTGCCATCTGGAATCTTTCAGTTGACAGGAATAGCGCTAAAAGAAATAAGTATTGGTTTT
TTCATTGGGTTATCATTTACTATTCTTTTTTGGGCAATAGATGCGGCTGGACAGATTATTGATACTCTAAGAGGCTCAAC
AATATCTTCAATTTTTAACCCGTCCATAAGTGATTCATCTTCTATCACTGGCGTTATCTTGTACCAATTTATCTCTGTGA
TCTTTGTTATTCATGGTGGGATACAAAGCATCCTAGATAAGCTATATTTATCCTACGAGATATTACCATTACAAGCCGAT
ATTGCATTCAATCGTGCTTTAATAGATTTTTTGTTTTCTCTATGGGATTCATTTATTAAACTGATGTTATCATTTTCAGT
TCCCATGATTATCGGTATATTCTTATGTGATATGGGGTTTGGGTTTCTTAACAAAACAGCACCTCAGCTAAACGTATTCA
CATTATCACTGCCAGTAAAAAGTTTGATAGCAATCTTTATATTGCTATTAGTTATTCATGTTTTTCCTGATTTTATTACG
GCAAATATTCATTCTGACATAATTGATAGATCGTTACCGAGCATGATTAATGAGTGA

Upstream 100 bases:

>100_bases
CAGTGTTTGCTACGCTTGCCCTGACTTATCACTGGATGGGAACAACAATCATCAACTTCTCGTCGATAATATTTGAAATG
ATTCCGAAGGTGAACGGCTA

Downstream 100 bases:

>100_bases
AAAAACAGAAAAGCCCACACCCAAAAAACTAAGGGATCTAAAAAAGAAGGGCGATGTAACAAAAAGTGAAGAGGTAATGG
CTGCAGTGCAGTCATTAATC

Product: type III secretion apparatus protein SpaR/YscT/HrcT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEKLPSGIFQLTGIALKEISIGF
FIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSSSITGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQAD
IAFNRALIDFLFSLWDSFIKLMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT
ANIHSDIIDRSLPSMINE

Sequences:

>Translated_258_residues
MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEKLPSGIFQLTGIALKEISIGF
FIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSSSITGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQAD
IAFNRALIDFLFSLWDSFIKLMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT
ANIHSDIIDRSLPSMINE
>Mature_258_residues
MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEKLPSGIFQLTGIALKEISIGF
FIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSSSITGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQAD
IAFNRALIDFLFSLWDSFIKLMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT
ANIHSDIIDRSLPSMINE

Specific function: Part of a type III secretion system [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 28718; Mature: 28718

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCHHHH
LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
SITGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHH
LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
ANIHSDIIDRSLPSMINE
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNEIMTVIVSSFYCILRPLGMFIILPIFSTGVLLSNFIRNSIMIAFTLPIIVENYTFSEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHCCCCHHHH
LPSGIFQLTGIALKEISIGFFIGLSFTILFWAIDAAGQIIDTLRGSTISSIFNPSISDSS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCC
SITGVILYQFISVIFVIHGGIQSILDKLYLSYEILPLQADIAFNRALIDFLFSLWDSFIK
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHH
LMLSFSVPMIIGIFLCDMGFGFLNKTAPQLNVFTLSLPVKSLIAIFILLLVIHVFPDFIT
HHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHH
ANIHSDIIDRSLPSMINE
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9140973; 11677609 [H]