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The map label for this gene is yjcB

Identifier: 209399303

GI number: 209399303

Start: 5203108

End: 5203389

Strand: Reverse

Name: yjcB

Synonym: ECH74115_5563

Alternate gene names: 209399303

Gene position: 5203389-5203108 (Counterclockwise)

Preceding gene: 209398875

Following gene: 209398765

Centisome position: 93.38

GC content: 53.9

Gene sequence:

>282_bases
ATGGCTACCCTCACCACTGGCGTGGTTCTTCTTCGCTGGCAACTTCTTAGTGCCGTAATGATGTTTCTGGCCAGCACGCT
CAACATCCGTTTTCGTCGGTCTGATTATGTCGGGCTTGCAGTGATCAGCAGCGGTCTGGGCGTGGTTTCCGCCTGCTGGT
TCGCAATGGGGTTGCTTGGCATCACAATGGCGGACATCACCGCCATCTGGCACAACATCGAGTCGGTGATGATAGAAGAG
ATGAATCAGACACCGCCACAGTGGCCAATGATTTTGACCTGA

Upstream 100 bases:

>100_bases
TTTGTGTTCTGCAAGCCCCGCGATAGCCAGAGTGTACCACGCCTCCCGTGAACAACGCCGCGCTGTCCAGGGCATCGGCT
CTTTTCAGAGGAATTGTTTG

Downstream 100 bases:

>100_bases
TACGTAGAAGCCTCCATAACGGAGGCTTCTTTTTTATGGCTGGCAGATGCTTTAATCATCCACCTTAAAACAATATAACC
TATTGTTTTAATGACAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLGITMADITAIWHNIESVMIEE
MNQTPPQWPMILT

Sequences:

>Translated_93_residues
MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLGITMADITAIWHNIESVMIEE
MNQTPPQWPMILT
>Mature_92_residues
ATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEM
NQTPPQWPMILT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082365, Length=93, Percent_Identity=100, Blast_Score=187, Evalue=9e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YJCB_ECOLI (P32700)

Other databases:

- EMBL:   U00006
- EMBL:   U00096
- EMBL:   AP009048
- RefSeq:   AP_004561.1
- RefSeq:   NP_418484.4
- STRING:   P32700
- EnsemblBacteria:   EBESCT00000005003
- EnsemblBacteria:   EBESCT00000015002
- GeneID:   948569
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5718
- KEGG:   eco:b4060
- EchoBASE:   EB1881
- EcoGene:   EG11937
- eggNOG:   NOG12333
- GeneTree:   EBGT00050000010281
- HOGENOM:   HBG416864
- OMA:   IARVYHA
- ProtClustDB:   CLSK880834
- BioCyc:   EcoCyc:EG11937-MONOMER
- Genevestigator:   P32700
- InterPro:   IPR016958
- PIRSF:   PIRSF030798
- ProDom:   PD064934

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10303; Mature: 10172

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
8.6 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
7.6 %Met     (Mature Protein)
8.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH
ITMADITAIWHNIESVMIEEMNQTPPQWPMILT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISSGLGVVSACWFAMGLLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHCCHHHHHHHHHHHHHHH
ITMADITAIWHNIESVMIEEMNQTPPQWPMILT
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503