Definition Escherichia coli O157:H7 str. EC4115, complete genome.
Accession NC_011353
Length 5,572,075

Click here to switch to the map view.

The map label for this gene is essD [H]

Identifier: 209399267

GI number: 209399267

Start: 2915323

End: 2915538

Strand: Reverse

Name: essD [H]

Synonym: ECH74115_3144

Alternate gene names: 209399267

Gene position: 2915538-2915323 (Counterclockwise)

Preceding gene: 209398350

Following gene: 209397513

Centisome position: 52.32

GC content: 53.7

Gene sequence:

>216_bases
ATGTACCAGATGGAAAAAATCACAACAGGTGTGTCATACACCACGTCAGCGGTGGGAACGGGCTACTGGTTCCTGCAGTT
GCTGGACAGGGTTTCCCCGTCTCAGTGGGCGGCAATAGGCGTGCTGGGGAGTCTGCTGTTTGGGCTGCTGACATATCTGA
CGAACCTGTATTTCAAGATTAAAGAAGACCGGCGTAAGGCGGCACGGGGAGAGTAA

Upstream 100 bases:

>100_bases
CGGACAGCGACATGATGATGTAAGCATGCGTCAGGGACCATCGGTGTGTGCCGGTGGTCTTTTTTATTGTTGTGAGCTTC
CGGATTGCGGGAGACGGGGT

Downstream 100 bases:

>100_bases
GCTGATGAGCAGGAAACTCCGCTATGGTTTATCGGCTGCCGTTCTGGCGCTGATTGCCGCAGGTGCTTCTGCGCCTGAAA
TCCTCGACCAGTTTCTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 71; Mature: 71

Protein sequence:

>71_residues
MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKIKEDRRKAARGE

Sequences:

>Translated_71_residues
MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKIKEDRRKAARGE
>Mature_71_residues
MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKIKEDRRKAARGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lambda phage S protein family [H]

Homologues:

Organism=Escherichia coli, GI1786767, Length=71, Percent_Identity=81.6901408450704, Blast_Score=122, Evalue=4e-30,
Organism=Escherichia coli, GI87081934, Length=71, Percent_Identity=80.2816901408451, Blast_Score=119, Evalue=3e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007054 [H]

Pfam domain/function: PF04971 Lysis_S [H]

EC number: NA

Molecular weight: Translated: 8026; Mature: 8026

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKI
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEDRRKAARGE
HHHHHHCCCCC
>Mature Secondary Structure
MYQMEKITTGVSYTTSAVGTGYWFLQLLDRVSPSQWAAIGVLGSLLFGLLTYLTNLYFKI
CCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEDRRKAARGE
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]