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The map label for this gene is ppdA [H]

Identifier: 209399023

GI number: 209399023

Start: 3790504

End: 3790974

Strand: Reverse

Name: ppdA [H]

Synonym: ECH74115_4091

Alternate gene names: 209399023

Gene position: 3790974-3790504 (Counterclockwise)

Preceding gene: 209400848

Following gene: 209397816

Centisome position: 68.04

GC content: 53.5

Gene sequence:

>471_bases
ATGAAAACACAACGTGGTTATACGCTGATTGAAACGCTGGTCGCGATGCTGATTTTGGTCATGCTAAGCGCAAGTGGACT
CTATGGCTGGCAATACTGGCAGCAGTCGCAACGGCTTTGGCAAACCGCCAGCCAGGCGCGGGACTATTTGCTCTATTTAC
GTGAAGATGCCAACTGGCATAACCGCGACCACAGTATCAGTTTTATCAGGGAGGGGACGTTATGGTGCCTTGTGAGTTCC
GTTGCTGGGGCGAATACCTGTCATGGCAGTTCACCATTGGTCTTTGTGCCACGCTGGCCCGAAGTCGAAATGAGCGACCT
GACACCTTCGCTTGCTTTCTTTGGCCTGCGCAATACCGCATGGGCCGGGCATATTGGCTTCAAAAACTCAACGGGCGAGT
GGTGGCTGGTGGTTTCGCCGTGGGGAAGACTCCGGCTTTGTCAGCAAGGAGAAACAGAAGGATGCCTGTAA

Upstream 100 bases:

>100_bases
ATTTTGCAACGTCCTGCAACGGCGTAAATAGTCCGGAAGATGCGCCGAAGAAATAGAAACTGGCCCTCGTCTTTTTTTCT
CCTCGCTCCATACTGCCGGC

Downstream 100 bases:

>100_bases
AAGAGCAAGGTTTTTCTCTGCTGGAAGTGTTGATTGCTATGGCGATCAGTAGCGTATTGTTGTTGGGGGCTGCACGCTTT
CTGCCTGCGTTACAGCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWHNRDHSISFIREGTLWCLVSS
VAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTAWAGHIGFKNSTGEWWLVVSPWGRLRLCQQGETEGCL

Sequences:

>Translated_156_residues
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWHNRDHSISFIREGTLWCLVSS
VAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTAWAGHIGFKNSTGEWWLVVSPWGRLRLCQQGETEGCL
>Mature_156_residues
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWHNRDHSISFIREGTLWCLVSS
VAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTAWAGHIGFKNSTGEWWLVVSPWGRLRLCQQGETEGCL

Specific function: Not yet known [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789190, Length=156, Percent_Identity=98.0769230769231, Blast_Score=315, Evalue=6e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 17843; Mature: 17843

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWH
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
NRDHSISFIREGTLWCLVSSVAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTA
CCCCCEEEEECCHHEEHHHHHCCCCCCCCCCCEEEECCCCCCCHHHCCCHHHHHCCCCCC
WAGHIGFKNSTGEWWLVVSPWGRLRLCQQGETEGCL
EECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTASQARDYLLYLREDANWH
CCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC
NRDHSISFIREGTLWCLVSSVAGANTCHGSSPLVFVPRWPEVEMSDLTPSLAFFGLRNTA
CCCCCEEEEECCHHEEHHHHHCCCCCCCCCCCEEEECCCCCCCHHHCCCHHHHHCCCCCC
WAGHIGFKNSTGEWWLVVSPWGRLRLCQQGETEGCL
EECCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]