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The map label for this gene is yccT

Identifier: 209398735

GI number: 209398735

Start: 1159937

End: 1160599

Strand: Reverse

Name: yccT

Synonym: ECH74115_1128

Alternate gene names: 209398735

Gene position: 1160599-1159937 (Counterclockwise)

Preceding gene: 209399500

Following gene: 209395706

Centisome position: 20.83

GC content: 50.53

Gene sequence:

>663_bases
ATGAAAACCGGCATCGTGACCACCTTGATTGCATTATGTTTGCCGGTATCCGTTTTTGCCACCACGCTGCGGCTTTCAAC
CGATGTCGATCTTCTGGTACTCGACGGCAAGAAGGTTTCCAGCTCTCTGCTGCGCGGTGCGGACAGCATTGAACTGGATA
ATGGACCGCATCAGTTAGTGTTTCGCGTTGAGAAGACGATTCATCTTTCCAATAGTGAAGAACGGCTGTATATCTCCCCA
CCGCTGGTGGTCAGTTTTAATACCCAGCTCATCAACCAGGTCAATTTTCGCCTGCCTCGCCTGGAGAATGAGCGGGAAGC
TAACCATTTTGATGCCGCGCCGCGCCTTGAATTGTTGGATGGCGATGCGACGCCGATTCCGGTAAAGCTGGATATTCTCG
CCATTACCTCAACGGCAAAAACGATTGATTATGAGGTCGAGGTTGAACGCTATAACAAATCCGCGAAACGCGCTTCACTA
CCGCAATTTGCCACGATGATGGCAGATGACAGTACGCTGCTTTCGGGTGTTTCCGAGCTGGATGCTATTCCACCGCAGTC
TCAGGTGCTCACAGAACAACGGCTGAAGTATTGGTTTAAACTGGCTGACCCACAAACGCGAAATACTTTCCTGCAATGGG
CGGAAAAACAACCATCTTCCTGA

Upstream 100 bases:

>100_bases
TGAGAGCAAAAGCGGGAAATATGTCTATATGTTAGTAAGTATGATTAAAGAAAAATTTTGACACATTATTATTCGGGCGG
TCTTTTGACAGGAGCTACCT

Downstream 100 bases:

>100_bases
GATTTTTGTGCCTGTGCGCAGGCTTTTTCGGTCTTTATCTTGCAGCGATAAGTGCTTACAGTAATCTGTAGGAAAGTTAA
CTACGGATGTACATTATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISP
PLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS

Sequences:

>Translated_220_residues
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISP
PLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS
>Mature_220_residues
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISP
PLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

Organism=Escherichia coli, GI1787198, Length=220, Percent_Identity=100, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YCCT_ECO24 (A7ZK68)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001462197.1
- ProteinModelPortal:   A7ZK68
- STRING:   A7ZK68
- EnsemblBacteria:   EBESCT00000020225
- GeneID:   5589620
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_1079
- eggNOG:   COG3110
- GeneTree:   EBGT00050000010368
- HOGENOM:   HBG473849
- OMA:   DPIVVTF
- ProtClustDB:   PRK03641
- BioCyc:   ECOL331111:ECE24377A_1079-MONOMER
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 24594; Mature: 24594

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEEECCCCCEEE
FRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLD
EEEEEEEEECCCCCEEEECCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEC
GDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL
CCCCCCEEEEEEEEEECCCEEEEEEEEEHHHCCHHHHCCCCHHHHHHCCCHHHHHHHHHH
DAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS
HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEEECCCCCEEE
FRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLD
EEEEEEEEECCCCCEEEECCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEC
GDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSEL
CCCCCCEEEEEEEEEECCCEEEEEEEEEHHHCCHHHHCCCCHHHHHHCCCHHHHHHHHHH
DAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS
HCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA