| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209398407
Identifier: 209398407
GI number: 209398407
Start: 3465263
End: 3466117
Strand: Reverse
Name: 209398407
Synonym: ECH74115_3744
Alternate gene names: NA
Gene position: 3466117-3465263 (Counterclockwise)
Preceding gene: 209397088
Following gene: 209399802
Centisome position: 62.21
GC content: 47.25
Gene sequence:
>855_bases ATGTTAAGTCATAACATAACGATTGGCGCGGAATGCGCGCGCCAACGCTTTCGTTTTGCAACATGTCATGCCTGTGTCGA GGCTTGCCCGGCACAGGCGCTAACGCTGACAGAAGAGGGCATAGCGGTCGACGCGGAACAATGTATTGATTGTGCGGTTT GCCAGTTTATTTGTCCGCAAGAGGCTATTCGTGGCGTTAATTCCCCTTTACGTTATTTTTGCAATCACACCCTGGTCGCA CCTTTCACCACTATTGCGCCGACGCTGGAAGAACTTTTGCTATGGCATAAAGAGCAGGGGATCACAGCGATCGCGATTGA TCTGAGTCAGGCGAAGGCATGGGAGCGCGCATTATTGCTGTTAAACGAATGCTTACGGCAATATGGCGAGGAAGGCTGGT CTGTGGTATCTCCACATACCAGTGAGGTGAATGTTTCCCGGCGTCGTTTGTTCCATGTGCAGCGTGCGGATGTTCAGATG ACACAAATACAACCAGGATTACGTCGGTTACATTATTTATGGCCCCAGATTAGTGATGCTCGCCCGATGATGGATCCTCA AAAGTGTCAGCTTTGCGGTGCATGCTGGCGGGCCTGCGAGCAACAGGTCTTTTCGCTTAACGAAGGCCATTTACAAATAA ATGATGCCTTGTGTAACGGATGCCAAAATTGTATTGCTGTTTGTTTTCATCAGGCAATGACCGTTGAATTGACGATTCTA CCGGCAAAAATTGTGAATCTTCATGCTAATCGCAAAGTCTGTAAAACCTGTCAAAAATCCTTTCTTACTTTTCAGCAAAA TGCGCAAAATTGTCTTTATTGCCAACGTCATCGTTATGGGATGAGAACACCATAA
Upstream 100 bases:
>100_bases TCGGTGGTTGTAAAAAGAATATCCCGGCGGCGTTATTCGGTAGCGTAATGCTAGTGGGGAGTGAAGTTATGCTGCGTTTT GTCTTTTTTAGTATCGGCTA
Downstream 100 bases:
>100_bases AAGTCGAGTTGTTGCTAAAACTCATTTTATTTTAAAAAAATGTTACCTTCATCAATAGTCAACGGCTCTGTTGCTCATTA TAATCCGCGCCATCTCGTAC
Product: putative polyferredoxin
Products: NA
Alternate protein names: Ferredoxin
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MLSHNITIGAECARQRFRFATCHACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIRGVNSPLRYFCNHTLVA PFTTIAPTLEELLLWHKEQGITAIAIDLSQAKAWERALLLLNECLRQYGEEGWSVVSPHTSEVNVSRRRLFHVQRADVQM TQIQPGLRRLHYLWPQISDARPMMDPQKCQLCGACWRACEQQVFSLNEGHLQINDALCNGCQNCIAVCFHQAMTVELTIL PAKIVNLHANRKVCKTCQKSFLTFQQNAQNCLYCQRHRYGMRTP
Sequences:
>Translated_284_residues MLSHNITIGAECARQRFRFATCHACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIRGVNSPLRYFCNHTLVA PFTTIAPTLEELLLWHKEQGITAIAIDLSQAKAWERALLLLNECLRQYGEEGWSVVSPHTSEVNVSRRRLFHVQRADVQM TQIQPGLRRLHYLWPQISDARPMMDPQKCQLCGACWRACEQQVFSLNEGHLQINDALCNGCQNCIAVCFHQAMTVELTIL PAKIVNLHANRKVCKTCQKSFLTFQQNAQNCLYCQRHRYGMRTP >Mature_284_residues MLSHNITIGAECARQRFRFATCHACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQEAIRGVNSPLRYFCNHTLVA PFTTIAPTLEELLLWHKEQGITAIAIDLSQAKAWERALLLLNECLRQYGEEGWSVVSPHTSEVNVSRRRLFHVQRADVQM TQIQPGLRRLHYLWPQISDARPMMDPQKCQLCGACWRACEQQVFSLNEGHLQINDALCNGCQNCIAVCFHQAMTVELTIL PAKIVNLHANRKVCKTCQKSFLTFQQNAQNCLYCQRHRYGMRTP
Specific function: Unknown
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32191; Mature: 32191
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 7.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHNITIGAECARQRFRFATCHACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQ CCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEECHHHHHHHHHHHHHCCH EAIRGVNSPLRYFCNHTLVAPFTTIAPTLEELLLWHKEQGITAIAIDLSQAKAWERALLL HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH LNECLRQYGEEGWSVVSPHTSEVNVSRRRLFHVQRADVQMTQIQPGLRRLHYLWPQISDA HHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC RPMMDPQKCQLCGACWRACEQQVFSLNEGHLQINDALCNGCQNCIAVCFHQAMTVELTIL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEEEE PAKIVNLHANRKVCKTCQKSFLTFQQNAQNCLYCQRHRYGMRTP HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MLSHNITIGAECARQRFRFATCHACVEACPAQALTLTEEGIAVDAEQCIDCAVCQFICPQ CCCCCCEECHHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCEECHHHHHHHHHHHHHCCH EAIRGVNSPLRYFCNHTLVAPFTTIAPTLEELLLWHKEQGITAIAIDLSQAKAWERALLL HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHH LNECLRQYGEEGWSVVSPHTSEVNVSRRRLFHVQRADVQMTQIQPGLRRLHYLWPQISDA HHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC RPMMDPQKCQLCGACWRACEQQVFSLNEGHLQINDALCNGCQNCIAVCFHQAMTVELTIL CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHEEEEEEE PAKIVNLHANRKVCKTCQKSFLTFQQNAQNCLYCQRHRYGMRTP HHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA