Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
---|---|
Accession | NC_011353 |
Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is apaG [H]
Identifier: 209398324
GI number: 209398324
Start: 56200
End: 56577
Strand: Reverse
Name: apaG [H]
Synonym: ECH74115_0056
Alternate gene names: 209398324
Gene position: 56577-56200 (Counterclockwise)
Preceding gene: 209397383
Following gene: 209398997
Centisome position: 1.02
GC content: 51.85
Gene sequence:
>378_bases ATGATCAATTCGCCCCGAGTGTGTATTCAGGTTCAAAGCGTCTACATTGAGGCACAATCTTCACCTGATAATGAACGTTA CGTTTTTGCTTATACCGTAACCATACGCAATCTGGGGCGAGCGCCAGTGCAGTTGTTGGGGCGTTACTGGCTGATCACCA ATGGCAATGGCCGTGAAACCGAAGTCCAGGGCGAAGGAGTGGTTGGCGTCCAGCCACTTATCGCGCCTGGCGAAGAGTAC CAGTACACCAGCGGTGCAATCATTGAAACCCCGCTGGGCACCATGCAGGGTCACTACGAAATGATCGATGAAAATGGCGT CCCTTTCAGCATCGACATTCCCGTATTCCGACTCGCCGTTCCCACACTCATTCATTAA
Upstream 100 bases:
>100_bases GGATCGACCCGGCGATGCGAGCGGAAAATATCTCTGTCGCGCAATATTGCCAGATGGCGAACTATCTGGCGGAGAACGCG CCTTTTCAGGAGAGTTAACG
Downstream 100 bases:
>100_bases AAGAATATGGCGACATACCTTATTGGCGACGTTCATGGTTGTTACGATGAACTGATCGCATTGCTGCATAAAGTAGAATT TACCCCTGGGAAAGATACCC
Product: ApaG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEY QYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
Sequences:
>Translated_125_residues MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEY QYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH >Mature_125_residues MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEY QYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAVPTLIH
Specific function: Unknown
COG id: COG2967
COG function: function code P; Uncharacterized protein affecting Mg2+/Co2+ transport
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 apaG domain [H]
Homologues:
Organism=Homo sapiens, GI15812188, Length=123, Percent_Identity=36.5853658536585, Blast_Score=70, Evalue=4e-13, Organism=Homo sapiens, GI15812186, Length=123, Percent_Identity=36.5853658536585, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1786235, Length=125, Percent_Identity=100, Blast_Score=255, Evalue=8e-70, Organism=Drosophila melanogaster, GI21356905, Length=113, Percent_Identity=34.5132743362832, Blast_Score=70, Evalue=3e-13, Organism=Drosophila melanogaster, GI24644238, Length=113, Percent_Identity=34.5132743362832, Blast_Score=70, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007474 - InterPro: IPR023065 [H]
Pfam domain/function: PF04379 DUF525 [H]
EC number: NA
Molecular weight: Translated: 13867; Mature: 13867
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS51087 APAG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRET CCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHEECEEEEEECCCCCEE EVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAV EECCCCEEECCCEECCCCCCEECCCCEEECCCCCCCCCEEEECCCCCCEEECCCCEEEEH PTLIH HHHCC >Mature Secondary Structure MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQLLGRYWLITNGNGRET CCCCCEEEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCCCCHHEECEEEEEECCCCCEE EVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMIDENGVPFSIDIPVFRLAV EECCCCEEECCCEECCCCCCEECCCCEEECCCCCCCCCEEEECCCCCCEEECCCCEEEEH PTLIH HHHCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA