Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is recX
Identifier: 209397890
GI number: 209397890
Start: 3650303
End: 3650803
Strand: Reverse
Name: recX
Synonym: ECH74115_3945
Alternate gene names: 209397890
Gene position: 3650803-3650303 (Counterclockwise)
Preceding gene: 209397319
Following gene: 209398791
Centisome position: 65.52
GC content: 51.7
Gene sequence:
>501_bases ATGACAGAATCAACGTCCCGTCGCCCGGCATATGCTCGCCTGTTGGATCGTGCGGTACGCATTCTGGCGGTGCGCGATCA CAGTGAGCAAGAACTGCGACGTAAACTCGCGGCACCGATTATGGGCAAAAATGGCCCAGAAGAGATTGATGCTACGGCAG AAGATTACGAGCGCGTTATTGCCTGGTGCCATGAACATGGCTATCTCGATGACAGCCGATTTGTTGCGCGCTTTATCGCC AGCCGTAGCCGCAAAGGTTATGGACCTGCGCGTATTCGCCAGGAACTGAATCAGAAAGGTATTTCCCGCGAAGCGACAGA AAAAGCGATGCGTGAATGTGACATCGACTGGTGCGCACTGGCGCGCGATCAGGCGACGCGAAAATATGGTGAACCTTTGC CAACTGTCTTTTCAGAAAAAGTTAAGATCCAGCGTTTTCTGCTCTATCGTGGCTATCTGATGGAAGATATCCAGGATATT TGGCGAAATTTTGCCGACTGA
Upstream 100 bases:
>100_bases GAAGGCGTAGCAGAAACTAACGAAGATTTTTAATCGTCTTGTTTGATACACAAGGGTCGCATCTGCGGCCCTTTTGCTTT TTAAGTTGTAAGGATATGCC
Downstream 100 bases:
>100_bases ACGCATACGGTATTTTACTTCCCAGTCAAGAAAACTTATCTTATTCCCACTTTTCAGTTACCAGCCCGGCGGTTAAGACA CGCTGGAGCTGGTGGCGATA
Product: recombination regulator RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIA SRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI WRNFAD
Sequences:
>Translated_166_residues MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIA SRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI WRNFAD >Mature_165_residues TESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIAS RSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIW RNFAD
Specific function: Modulates recA activity
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family
Homologues:
Organism=Escherichia coli, GI1789050, Length=166, Percent_Identity=99.3975903614458, Blast_Score=341, Evalue=1e-95,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RECX_ECO24 (A7ZQC7)
Other databases:
- EMBL: CP000800 - RefSeq: YP_001464006.1 - ProteinModelPortal: A7ZQC7 - SMR: A7ZQC7 - STRING: A7ZQC7 - EnsemblBacteria: EBESCT00000019015 - GeneID: 5588337 - GenomeReviews: CP000800_GR - KEGG: ecw:EcE24377A_2982 - eggNOG: COG2137 - GeneTree: EBGT00050000010500 - HOGENOM: HBG638240 - OMA: RYLESFI - ProtClustDB: PRK00117 - BioCyc: ECOL331111:ECE24377A_2982-MONOMER - GO: GO:0005737 - HAMAP: MF_01114 - InterPro: IPR003783
Pfam domain/function: PF02631 RecX
EC number: NA
Molecular weight: Translated: 19410; Mature: 19279
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVI CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHH AWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCAL HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH ARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIWRNFAD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVI CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHH AWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCAL HHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHH ARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIWRNFAD HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA