Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
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Accession | NC_011353 |
Length | 5,572,075 |
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The map label for this gene is 209397799
Identifier: 209397799
GI number: 209397799
Start: 3593190
End: 3593801
Strand: Reverse
Name: 209397799
Synonym: ECH74115_3885
Alternate gene names: NA
Gene position: 3593801-3593190 (Counterclockwise)
Preceding gene: 209399981
Following gene: 209397632
Centisome position: 64.5
GC content: 46.24
Gene sequence:
>612_bases ATGCGAATCTATCGAAGGAAATGTAAATGTTGCAATGAATGGTTTATACCAAAATATCAAAATCAATATTGGTGTAATGA GATTTGTGGAACCAAGATAGCACTCGAACGACGAAGTAAAGAACGCGAAAAAGCGGAAAAGGCAGAAAAGGCAGCAGAGA AGAAACGACGACGAGAGGAGCAGAAACAGAAAGATAAACTTAAGATTCAAAAACTCGCCTTAAAGCCCCGCAGTTACTGG ATTAAACAAGCCCAACAAGCCGTACACGCCTTCATCAGAGAAAGAGACCGCGACTTACCATGTATCTCGTGCGGAACGCT CACGTCTGCTCAGTGGGATGCCGGACATTACCGGACAACTGCTGCGGCACCTCAACTCCGATTTGATGAACGCAATATTC ACAAGCAATGCGTGGTGTGCAACCAGCACAAAAGCGGAAATCTCGTTCCGTATCGCGTCGAACTGATTAGCCGCATCGGG CAGGAAGCAGTAGAGGAAATCGAATCAAACCATAACCGCTATCGCTGGACTGTCGAAGAGTGCAGGGCCATCAAGGCGGA GTATCAACAGAAACTTAAAAAACTGCGAAACAGCAGAAGTGAGGTTGCATGA
Upstream 100 bases:
>100_bases CACTTCGGATGCTTTGATGATCTGGAGTTAGCGGTACTAGTTGCTGAAGAAGCCCGAGATAAGTATTACGGTGATTTTTC CGGCAACGAAAGGAGCACTT
Downstream 100 bases:
>100_bases ATATCTACGAAAGAATTGATGGCAGCAAATACCGAAATATTTGGGTAGTTGGCGATCTGCACGGATGCTACACGAACCTG ATGAAAAAACTGGAGACGAT
Product: bacteriophage Lambda NinG protein
Products: NA
Alternate protein names: NinG Protein; Lambda NinG Family Protein; NinG-Like Phage Protein; Bacteriophage Lambda NinG; Bacteriophage Lambda NinG Protein; Recombination Endonuclease; NinG Recombination Protein; Phage NinG Protein; Structure-Specific Endonuclease; Lambda Ning Family Protein; Recombination Protein NinG; Protein NinG
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MRIYRRKCKCCNEWFIPKYQNQYWCNEICGTKIALERRSKEREKAEKAEKAAEKKRRREEQKQKDKLKIQKLALKPRSYW IKQAQQAVHAFIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELISRIG QEAVEEIESNHNRYRWTVEECRAIKAEYQQKLKKLRNSRSEVA
Sequences:
>Translated_203_residues MRIYRRKCKCCNEWFIPKYQNQYWCNEICGTKIALERRSKEREKAEKAEKAAEKKRRREEQKQKDKLKIQKLALKPRSYW IKQAQQAVHAFIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELISRIG QEAVEEIESNHNRYRWTVEECRAIKAEYQQKLKKLRNSRSEVA >Mature_203_residues MRIYRRKCKCCNEWFIPKYQNQYWCNEICGTKIALERRSKEREKAEKAEKAAEKKRRREEQKQKDKLKIQKLALKPRSYW IKQAQQAVHAFIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELISRIG QEAVEEIESNHNRYRWTVEECRAIKAEYQQKLKKLRNSRSEVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24270; Mature: 24270
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIYRRKCKCCNEWFIPKYQNQYWCNEICGTKIALERRSKEREKAEKAEKAAEKKRRREE CCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKQKDKLKIQKLALKPRSYWIKQAQQAVHAFIRERDRDLPCISCGTLTSAQWDAGHYRTT HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC AAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELISRIGQEAVEEIESNHNRYRWTVEE CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH CRAIKAEYQQKLKKLRNSRSEVA HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRIYRRKCKCCNEWFIPKYQNQYWCNEICGTKIALERRSKEREKAEKAEKAAEKKRRREE CCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QKQKDKLKIQKLALKPRSYWIKQAQQAVHAFIRERDRDLPCISCGTLTSAQWDAGHYRTT HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCC AAAPQLRFDERNIHKQCVVCNQHKSGNLVPYRVELISRIGQEAVEEIESNHNRYRWTVEE CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH CRAIKAEYQQKLKKLRNSRSEVA HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA