| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397792
Identifier: 209397792
GI number: 209397792
Start: 2701577
End: 2702335
Strand: Reverse
Name: 209397792
Synonym: ECH74115_2915
Alternate gene names: NA
Gene position: 2702335-2701577 (Counterclockwise)
Preceding gene: 209395913
Following gene: 209400935
Centisome position: 48.5
GC content: 44.53
Gene sequence:
>759_bases ATGACAACTAAAATTTCTGTTGAAACTCTCTCCCCGATCACCCATAACCAGATTCCTGTTATTACCACCGAACTTTTGGC GCAGCTTTACGGCACTGAGCCGGTGCGTATTCGCCAGAATCATCATGAGAACAAAGTACGCTTCGTTGAAGGGAAACACT TTTTCAAAGTTGTTGGTAATGACCTTAAAGAATTGCGGGTAGCTTTAAACTACTCACAAAATTTGCGGGTTACTTTAAGT AACTCACAAAATTTGCGGGTTACTTTAAGTAACTCACAAAATTTGCAACCATCTTTAAGAGGGTTACAAATTTCCCCGAA AGCCCGCTCCCTCATCCTCTGGACAGAACGCGGCGCAGCCCGTCACGCAAAAATGCTCGAAACCGATCGGGCGTGGGAAG TGTTCGAAAAACTGGAAGACTGCTATTTCAGTCAAAAAATCCCAGAACAACTTCAGCTTCCAGAATCAACACTATCTATC AACTACCCTCTCTCGTGGTTTTCAGAGCATCACCCCTACTCCATGATGAGCTATGTTGATCGAAAAACTCTTAACCTGGA CGTTTCTGTGCTCTTCGATATGCCAAGCCCAACTATGCGCATCCTCAACGAGCTACACAGCAAGGGCTATAACGTCGATG CAGCTGTCGCCGAATTTAACGCCTTCAAGCATCTGACGGAAGAAATGCGCCGTACTCTACAGGATATTTCAAGATTGTCA GATCGAAATTCCCGAAAAGGCTTCTCGTTAAGTCTTTAA
Upstream 100 bases:
>100_bases GCCGGTCGGTTTCCCGGTTACGCCAACCCTGCACAGTTCACCACCAGACGATTGGCGTCGTCGGTGGTGAGTTATTAAGA AACCACCAGAGGGCGTCATT
Downstream 100 bases:
>100_bases AGAACAGATCGTTTGACAATGCTGCATTAACGGGGATATATTCCGCCTCATGGTGCTCAAAACACCTTAGCAAGTAGCGG TTACCGCGCCCGACAGACAT
Product: putative open reading frame
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTTKISVETLSPITHNQIPVITTELLAQLYGTEPVRIRQNHHENKVRFVEGKHFFKVVGNDLKELRVALNYSQNLRVTLS NSQNLRVTLSNSQNLQPSLRGLQISPKARSLILWTERGAARHAKMLETDRAWEVFEKLEDCYFSQKIPEQLQLPESTLSI NYPLSWFSEHHPYSMMSYVDRKTLNLDVSVLFDMPSPTMRILNELHSKGYNVDAAVAEFNAFKHLTEEMRRTLQDISRLS DRNSRKGFSLSL
Sequences:
>Translated_252_residues MTTKISVETLSPITHNQIPVITTELLAQLYGTEPVRIRQNHHENKVRFVEGKHFFKVVGNDLKELRVALNYSQNLRVTLS NSQNLRVTLSNSQNLQPSLRGLQISPKARSLILWTERGAARHAKMLETDRAWEVFEKLEDCYFSQKIPEQLQLPESTLSI NYPLSWFSEHHPYSMMSYVDRKTLNLDVSVLFDMPSPTMRILNELHSKGYNVDAAVAEFNAFKHLTEEMRRTLQDISRLS DRNSRKGFSLSL >Mature_251_residues TTKISVETLSPITHNQIPVITTELLAQLYGTEPVRIRQNHHENKVRFVEGKHFFKVVGNDLKELRVALNYSQNLRVTLSN SQNLRVTLSNSQNLQPSLRGLQISPKARSLILWTERGAARHAKMLETDRAWEVFEKLEDCYFSQKIPEQLQLPESTLSIN YPLSWFSEHHPYSMMSYVDRKTLNLDVSVLFDMPSPTMRILNELHSKGYNVDAAVAEFNAFKHLTEEMRRTLQDISRLSD RNSRKGFSLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29144; Mature: 29012
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKISVETLSPITHNQIPVITTELLAQLYGTEPVRIRQNHHENKVRFVEGKHFFKVVGN CCCEEEHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHC DLKELRVALNYSQNLRVTLSNSQNLRVTLSNSQNLQPSLRGLQISPKARSLILWTERGAA CHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCHHCCEEECCCCCEEEEEECCCCH RHAKMLETDRAWEVFEKLEDCYFSQKIPEQLQLPESTLSINYPLSWFSEHHPYSMMSYVD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHEEEECCHHHHCCCCCHHHHHHHH RKTLNLDVSVLFDMPSPTMRILNELHSKGYNVDAAVAEFNAFKHLTEEMRRTLQDISRLS HHHEEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRNSRKGFSLSL CCCCCCCCEECC >Mature Secondary Structure TTKISVETLSPITHNQIPVITTELLAQLYGTEPVRIRQNHHENKVRFVEGKHFFKVVGN CCEEEHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCEEEECCCHHHHHHHC DLKELRVALNYSQNLRVTLSNSQNLRVTLSNSQNLQPSLRGLQISPKARSLILWTERGAA CHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCHHCCEEECCCCCEEEEEECCCCH RHAKMLETDRAWEVFEKLEDCYFSQKIPEQLQLPESTLSINYPLSWFSEHHPYSMMSYVD HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHEEEECCHHHHCCCCCHHHHHHHH RKTLNLDVSVLFDMPSPTMRILNELHSKGYNVDAAVAEFNAFKHLTEEMRRTLQDISRLS HHHEEEEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH DRNSRKGFSLSL CCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA