Click here to switch to the map view.

The map label for this gene is yacC

Identifier: 209397732

GI number: 209397732

Start: 140923

End: 141270

Strand: Reverse

Name: yacC

Synonym: ECH74115_0129

Alternate gene names: 209397732

Gene position: 141270-140923 (Counterclockwise)

Preceding gene: 209396813

Following gene: 209395821

Centisome position: 2.54

GC content: 49.43

Gene sequence:

>348_bases
ATGAAGACGTTTTTCAGAACAGTGTTATTCGGCAGCCTGATGGCCGTTTGCGCAAACAGTTACGCGCTCAGTGAGTCTGA
AGCCGAAGATATGGCCGATTTAACGGCAGTTTTTGTCTTTCTGAAGAACGATTGTGGTTACCAGAACTTACCTAACGGGC
AAATTCGTCGCGCACTGGTCTTTTTCGCCCAGCAAAACCAGTGGGATCTCAGTAATTACGACACCTTCGACATGAAAGCT
CTCGGTGAAGACAGCTACCGCGATCTCAGCGGCATTGGCATTCCCGTCGCTAAAAAGTGCAAGGCCCTGGCTCGCGATTC
CTTAAGCCTGCTTGCCTACGTCAAATAA

Upstream 100 bases:

>100_bases
GGGAAGGTCAAGCCGCAGACACAATTTAATCGACAATAATGGTCGTCGCCTCGCTCGCAGTGTGCTAACGTTTATCTTCT
TTAAGCCCCTGGTAGAAGCA

Downstream 100 bases:

>100_bases
TCCCTGATACCTTTTTGTAGAAATATTGACCGTGCATCCGCGGTCAATGTTAGCTATTATGTTGCGCCCTTTTTTTACGG
GTGTTAACAAAGGAGGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKA
LGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK

Sequences:

>Translated_115_residues
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKA
LGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
>Mature_115_residues
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKA
LGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081688, Length=115, Percent_Identity=100, Blast_Score=238, Evalue=1e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YACC_ECOL6 (P0AA96)

Other databases:

- EMBL:   AE014075
- RefSeq:   NP_752101.1
- ProteinModelPortal:   P0AA96
- EnsemblBacteria:   EBESCT00000045240
- GeneID:   1039884
- GenomeReviews:   AE014075_GR
- KEGG:   ecc:c0151
- GeneTree:   EBGT00050000010662
- HOGENOM:   HBG416681
- OMA:   IAVCANS
- ProtClustDB:   CLSK879559
- InterPro:   IPR019114

Pfam domain/function: PF09691 PulS_OutS

EC number: NA

Molecular weight: Translated: 12854; Mature: 12854

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALV
CHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
FFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
HHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHEECC
>Mature Secondary Structure
MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKNDCGYQNLPNGQIRRALV
CHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
FFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKALARDSLSLLAYVK
HHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157