| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ybhA [H]
Identifier: 209397698
GI number: 209397698
Start: 884847
End: 885767
Strand: Reverse
Name: ybhA [H]
Synonym: ECH74115_0869
Alternate gene names: 209397698
Gene position: 885767-884847 (Counterclockwise)
Preceding gene: 209396612
Following gene: 209400782
Centisome position: 15.9
GC content: 50.71
Gene sequence:
>921_bases TTGGCGGTGAATGCTGAATTAAAACGCAGAATTTTGTCCGATAGTGGTATCGGTGTACCATTCGCGCAGAAGAAAATTCT TAACCTTAATCTGGAATACGCCATGACCACACGCGTGATTGCTCTCGACTTAGACGGCACCTTATTGACCCCGAAAAAGA CCCTGCTACCTTCATCGATAGAAGCCCTGGCCCGCGCTCGCGAAGCAGGTTATCAATTAATCATCGTCACAGGTCGCCAT CACGTCGCTATTCATCCTTTTTATCAGGCGCTGGCGCTGGATACACCTGCTATTTGCTGTAATGGCACCTATTTGTATGA TTATCATGCAAAAACCGTGCTGGAAGCGGACCCAATGCCCGTTAATAAAGCCCTACAACTCATTGAGATGCTGAATGAAC ACCACATTCACGGTCTGATGTATGTCGATGACGAGATGGTTTATGAGCACCCGACCGGGCATGTCATTCGCACGTCTAAC TGGGCGCAAACCCTGCCGCCGGAACAGCGTCCGACTTTCACACAAGTCGCTTCTCTGGCTGAAACGGCGCAACAAGTTAA CGCCGTATGGAAGTTCGCCCTCACGCACGATGACCTGCCGCAATTGCAGCATTTTGGTAAGCATGTCGAACATGAACTGG GACTGGAGTGTGAATGGTCCTGGCACGATCAGGTTGATATTGCACGCGGCGGCAACAGCAAAGGTAAACGTTTGACGAAA TGGGTTGAGGCGCAAGGCTGGTCGATGGAAAACGTCGTGGCGTTCGGCGATAACTTTAATGATATCAGTATGCTGGAGGC CGCTGGTACAGGCGTGGCGATGGGCAACGCCGATGACGCGGTAAAAGCGCGCGCCAACATTGTGATTGGTGATAACACCA CCGACAGCATTGCCCAGTTCATTTATAGCCACCTGATTTAA
Upstream 100 bases:
>100_bases GTGAATTTGCTGGCTCTCAGGGCTGGCGATATAAACTGTTTGCTTCATGAATGCTCCTTTGCATTTAGCAACTGACTGTA ACAGCTAAAATTAGTCGCTT
Downstream 100 bases:
>100_bases TCAGGCGGTTATCGACACACTTTTAATTTGCGCGTACAGCCACAGGCCAGGTTTGATCGCCAGTTCATCCCTGGCCCACG GGCTGATACGCGCCCACAGC
Product: phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MAVNAELKRRILSDSGIGVPFAQKKILNLNLEYAMTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRH HVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDEMVYEHPTGHVIRTSN WAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTK WVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
Sequences:
>Translated_306_residues MAVNAELKRRILSDSGIGVPFAQKKILNLNLEYAMTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRH HVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDEMVYEHPTGHVIRTSN WAQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTK WVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI >Mature_305_residues AVNAELKRRILSDSGIGVPFAQKKILNLNLEYAMTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTGRHH VAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEMLNEHHIHGLMYVDDEMVYEHPTGHVIRTSNW AQTLPPEQRPTFTQVASLAETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKW VEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates pyridoxalphosphate and erythrose 4-phosphate [H]
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI1786982, Length=272, Percent_Identity=99.2647058823529, Blast_Score=565, Evalue=1e-162, Organism=Escherichia coli, GI48994981, Length=273, Percent_Identity=28.2051282051282, Blast_Score=87, Evalue=1e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001757 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR000150 - InterPro: IPR006380 [H]
Pfam domain/function: PF00702 Hydrolase; PF05116 S6PP [H]
EC number: NA
Molecular weight: Translated: 34016; Mature: 33885
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS01228 COF_1 ; PS01229 COF_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNAELKRRILSDSGIGVPFAQKKILNLNLEYAMTTRVIALDLDGTLLTPKKTLLPSSI CCCCHHHHHHHHCCCCCCCCHHHHEEEEEEEEEEEEEEEEEEECCCEEECCHHHHCHHHH EALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMP HHHHHHHHCCCEEEEEECCCEEEECHHHHHHHCCCCCEEECCCEEEEECCCEEEECCCCC VNKALQLIEMLNEHHIHGLMYVDDEMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLA HHHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHH ETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTK HHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCHHHHH WVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQF HHHHCCCCCCCEEEECCCCCCHHHHHHCCCCEEECCCCHHHHEEEEEEECCCCHHHHHHH IYSHLI HHHHCC >Mature Secondary Structure AVNAELKRRILSDSGIGVPFAQKKILNLNLEYAMTTRVIALDLDGTLLTPKKTLLPSSI CCCHHHHHHHHCCCCCCCCHHHHEEEEEEEEEEEEEEEEEEECCCEEECCHHHHCHHHH EALARAREAGYQLIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMP HHHHHHHHCCCEEEEEECCCEEEECHHHHHHHCCCCCEEECCCEEEEECCCEEEECCCCC VNKALQLIEMLNEHHIHGLMYVDDEMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLA HHHHHHHHHHHHHCCEEEEEEECCCEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHH ETAQQVNAVWKFALTHDDLPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTK HHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCCCHHHHH WVEAQGWSMENVVAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQF HHHHCCCCCCCEEEECCCCCCHHHHHHCCCCEEECCCCHHHHEEEEEEECCCCHHHHHHH IYSHLI HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7665460; 8564363; 8905232; 9278503 [H]