| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yfjX [H]
Identifier: 209397636
GI number: 209397636
Start: 1396298
End: 1396783
Strand: Direct
Name: yfjX [H]
Synonym: ECH74115_1401
Alternate gene names: 209397636
Gene position: 1396298-1396783 (Clockwise)
Preceding gene: 209396732
Following gene: 209398241
Centisome position: 25.06
GC content: 55.14
Gene sequence:
>486_bases ATGACAACCGTTTCGCATAATTCCACCACACCTTCTGTTTCCGTAACCACTGCATCAGGGAATAACCCACCTCAGCTGGT TGCCACTCCCGTCCCTGATGAACAGCGCATCAGCTTCTGGCCGCAGCATTTTGGCCTCATTCCACAGTGGGTGACCCTGG AGCCCCGTGTCTTCGGCTGGATGGACCGTCTTTGCGAAGACTACTGCGGTGGTATCTGGAATCTGTACACCCTGAACAAC GGCGGGGCATTTATGGCACCCGAACCGGATGACGATGATGACGAAACATGGGTACTGTTCAATGCCATGAACGGCAACCG CGCTGAAATGAGCCCGGAAGCCGCCGGTATTGCTGCCTGTCTGATGACGTACAGTCATCATGCCTGTCGTACGGAGTGTT ATGCCATGACGGTCCACTATTACCGGCTGCGGGATTACGCCCTGCAGCATCCGGAATGCAGCGCCATTATGCGCATCATT GACTGA
Upstream 100 bases:
>100_bases CATGCGCTGATGCCGTTTCACTGAAAGTGCAGTCCTGACTCACATCTGTTCCTGCCCCGGGGCTTCTTCCATTCATTTAC TTTTTATAAGGAATAACCTC
Downstream 100 bases:
>100_bases ATGGAGGCAGGGACAATGCAGCAGCTTTCCTTTCTGCCCGGAGAGATGACGCCCGGCGAGCGCAGTCTCATTCTGCGGGC CCTGCAAACCCTGGACCGCC
Product: antirestriction protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MTTVSHNSTTPSVSVTTASGNNPPQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN GGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII D
Sequences:
>Translated_161_residues MTTVSHNSTTPSVSVTTASGNNPPQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNN GGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRII D >Mature_160_residues TTVSHNSTTPSVSVTTASGNNPPQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGWMDRLCEDYCGGIWNLYTLNNG GAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAACLMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the antirestriction protein family [H]
Homologues:
Organism=Escherichia coli, GI1788996, Length=137, Percent_Identity=75.1824817518248, Blast_Score=224, Evalue=2e-60, Organism=Escherichia coli, GI1786442, Length=145, Percent_Identity=71.0344827586207, Blast_Score=223, Evalue=4e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004914 - ProDom: PD012854 [H]
Pfam domain/function: PF03230 Antirestrict [H]
EC number: NA
Molecular weight: Translated: 18137; Mature: 18005
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 8.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVSHNSTTPSVSVTTASGNNPPQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGW CCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEECHHHCCCCCCEEEECCHHHHH MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAAC HHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH LMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID HHHHCCCHHHHEEEEEEHHHHHHHHHHCCCCCHHHHHHHCC >Mature Secondary Structure TTVSHNSTTPSVSVTTASGNNPPQLVATPVPDEQRISFWPQHFGLIPQWVTLEPRVFGW CCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCEECHHHCCCCCCEEEECCHHHHH MDRLCEDYCGGIWNLYTLNNGGAFMAPEPDDDDDETWVLFNAMNGNRAEMSPEAAGIAAC HHHHHHHHCCCEEEEEEECCCCEEECCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHH LMTYSHHACRTECYAMTVHYYRLRDYALQHPECSAIMRIID HHHHCCCHHHHEEEEEEHHHHHHHHHHCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]