Click here to switch to the map view.

The map label for this gene is ydfC [H]

Identifier: 209397564

GI number: 209397564

Start: 1742212

End: 1742430

Strand: Reverse

Name: ydfC [H]

Synonym: ECH74115_1826

Alternate gene names: 209397564

Gene position: 1742430-1742212 (Counterclockwise)

Preceding gene: 209396698

Following gene: 209399784

Centisome position: 31.27

GC content: 47.49

Gene sequence:

>219_bases
ATGCAGAAACGAGAACCCGTCATCATCGCACCAGACTATACCGATGATGAACTTTATGAGTGGATGCGCCAGAAAATTAA
TGCAGCGCAGGATCTGAAATGGGCCAATGAAGCCAGGGCTAAGCAGGCTGAAAAACTGTCCGCTCTGGAGCAGGATATCA
CCAATCTGGAAAAAGCAGCGGCATTAAGCATTGCCAGAATGATTACATACCCGCGTTAA

Upstream 100 bases:

>100_bases
ACGGCGAAGAAGCTCTCAGCTTCAACGAATTTAAACAGGCGCTTTCCAGCTCGGCAAAATCTAACGGCTGATAAGCGAAA
CAGCACCGCGAGGAATCAGT

Downstream 100 bases:

>100_bases
TAGCTAACCAACGAAGCTAAGGTTGGTAATTAAGTAGTTCTCCACGGGTGAGGTGGAGTGCGTGCGCCGGACGCGGGTGA
GCATCCGGCACTGACAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAEKLSALEQDITNLEKAAALSIARMITYPR

Sequences:

>Translated_72_residues
MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAEKLSALEQDITNLEKAAALSIARMITYPR
>Mature_72_residues
MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAEKLSALEQDITNLEKAAALSIARMITYPR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787856, Length=72, Percent_Identity=98.6111111111111, Blast_Score=142, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8365; Mature: 8365

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAEKLSALEQDITNLEKAA
CCCCCCEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSIARMITYPR
HHHHHHHHHCCC
>Mature Secondary Structure
MQKREPVIIAPDYTDDELYEWMRQKINAAQDLKWANEARAKQAEKLSALEQDITNLEKAA
CCCCCCEEECCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSIARMITYPR
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3041373; 9097039; 9278503 [H]