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The map label for this gene is yjiK [H]

Identifier: 209397482

GI number: 209397482

Start: 4725848

End: 4726666

Strand: Direct

Name: yjiK [H]

Synonym: ECH74115_5082

Alternate gene names: 209397482

Gene position: 4725848-4726666 (Clockwise)

Preceding gene: 209396719

Following gene: 209397051

Centisome position: 84.81

GC content: 36.51

Gene sequence:

>819_bases
ATGAAAAGAAAACCATTGATTGCATTTTTCATCGCGATATTTATTGCACTAACCATATTAATATTATTTCCATTTAATTG
TACTTACAAAAAATCACCTCAAGAACACTCACTTTCATTTATAAAACAATTACCAAATACGGTGAACTTATCATCTCTTA
CTTATAATAAAGAGGATGATTTCCTGTATGCCACCCAGAATAGCCCTGCACAGCTACTTAAAATAACCAAAAGTGGCGAC
ATCATGGACAGAGCCCCACTGCCTTTTATCTCTGATGCCGAAACAATTGAACACATACAAGGGAACATTTTTGCTGCAGT
AGACGAAAAGACTTCTGAACTATTCTTTTTTACAGTTACAAAAGATATGCATATCTCCTTTCGAAATAAAATTCAGTTAG
AAAAATTCAATAAAAAGAATAGAGGGTTTGAAGGGCTGGCATGGAAAGCAGATGATCGGATGCTGTTTGTCGCAAAAGAA
AGACGCCCAAGTAAAATATTTATATATCAACTTTCTCCAGACCTGCTGAGTGTAAAGCAAGCAACTATTCCAGAGGCACT
AAATGATATACGTGTTAACGATATATCCGGCCTGGCCTTTAATAATGAAAGTCTGATGATTCTGTCCGATGAATCGCGTA
AATTACTCAAGTTTAACCTGACAGAGATGTCTTTCATTGAGATGCTTGACCTGACAAAAGGAAATCATTCTCTGACCAGT
GATTTGCCCCAACCTGAAGGAATTGTAACTCTGCCTGATGAAAGCATTTATGTTGCCAGTGAACCTGATATCCTCGCGAA
ATTTGTCCCTAATAAGTAA

Upstream 100 bases:

>100_bases
AATAGAAACCACACCCATAATTATTAACAATTTATTCCGAAGTTAATCACAATTAAACAAAGATATTTATTCTGCAAACA
ATTTACAGCAAATAGAGAAA

Downstream 100 bases:

>100_bases
GTCTGTCACTGGCCTTATTATTTATCGACCAAACCTGGCAATCTCATAAAGTTATAAAAATACGAGTATAATTTCACGCT
AAATAAACACATTAATAGTT

Product: sdiA-regulated domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKRKPLIAFFIAIFIALTILILFPFNCTYKKSPQEHSLSFIKQLPNTVNLSSLTYNKEDDFLYATQNSPAQLLKITKSGD
IMDRAPLPFISDAETIEHIQGNIFAAVDEKTSELFFFTVTKDMHISFRNKIQLEKFNKKNRGFEGLAWKADDRMLFVAKE
RRPSKIFIYQLSPDLLSVKQATIPEALNDIRVNDISGLAFNNESLMILSDESRKLLKFNLTEMSFIEMLDLTKGNHSLTS
DLPQPEGIVTLPDESIYVASEPDILAKFVPNK

Sequences:

>Translated_272_residues
MKRKPLIAFFIAIFIALTILILFPFNCTYKKSPQEHSLSFIKQLPNTVNLSSLTYNKEDDFLYATQNSPAQLLKITKSGD
IMDRAPLPFISDAETIEHIQGNIFAAVDEKTSELFFFTVTKDMHISFRNKIQLEKFNKKNRGFEGLAWKADDRMLFVAKE
RRPSKIFIYQLSPDLLSVKQATIPEALNDIRVNDISGLAFNNESLMILSDESRKLLKFNLTEMSFIEMLDLTKGNHSLTS
DLPQPEGIVTLPDESIYVASEPDILAKFVPNK
>Mature_272_residues
MKRKPLIAFFIAIFIALTILILFPFNCTYKKSPQEHSLSFIKQLPNTVNLSSLTYNKEDDFLYATQNSPAQLLKITKSGD
IMDRAPLPFISDAETIEHIQGNIFAAVDEKTSELFFFTVTKDMHISFRNKIQLEKFNKKNRGFEGLAWKADDRMLFVAKE
RRPSKIFIYQLSPDLLSVKQATIPEALNDIRVNDISGLAFNNESLMILSDESRKLLKFNLTEMSFIEMLDLTKGNHSLTS
DLPQPEGIVTLPDESIYVASEPDILAKFVPNK

Specific function: Unknown

COG id: COG3204

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yjiK family [H]

Homologues:

Organism=Escherichia coli, GI145693216, Length=279, Percent_Identity=31.8996415770609, Blast_Score=127, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR009722 [H]

Pfam domain/function: PF06977 SdiA-regulated [H]

EC number: NA

Molecular weight: Translated: 31004; Mature: 31004

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKPLIAFFIAIFIALTILILFPFNCTYKKSPQEHSLSFIKQLPNTVNLSSLTYNKEDD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
FLYATQNSPAQLLKITKSGDIMDRAPLPFISDAETIEHIQGNIFAAVDEKTSELFFFTVT
EEEEECCCCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCEEEEEEEE
KDMHISFRNKIQLEKFNKKNRGFEGLAWKADDRMLFVAKERRPSKIFIYQLSPDLLSVKQ
CCEEEEECCEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEECCCHHHHHH
ATIPEALNDIRVNDISGLAFNNESLMILSDESRKLLKFNLTEMSFIEMLDLTKGNHSLTS
HHHHHHHHCCEEECCCCEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCC
DLPQPEGIVTLPDESIYVASEPDILAKFVPNK
CCCCCCCEEECCCCCEEEECCCCEEEECCCCC
>Mature Secondary Structure
MKRKPLIAFFIAIFIALTILILFPFNCTYKKSPQEHSLSFIKQLPNTVNLSSLTYNKEDD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
FLYATQNSPAQLLKITKSGDIMDRAPLPFISDAETIEHIQGNIFAAVDEKTSELFFFTVT
EEEEECCCCHHEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCEEEEEEEE
KDMHISFRNKIQLEKFNKKNRGFEGLAWKADDRMLFVAKERRPSKIFIYQLSPDLLSVKQ
CCEEEEECCEEEEEECCCCCCCCCCEEEECCCCEEEEEECCCCCEEEEEEECCCHHHHHH
ATIPEALNDIRVNDISGLAFNNESLMILSDESRKLLKFNLTEMSFIEMLDLTKGNHSLTS
HHHHHHHHCCEEECCCCEEECCCEEEEEECCCCEEEEEECCHHHHHHHHHCCCCCCCCCC
DLPQPEGIVTLPDESIYVASEPDILAKFVPNK
CCCCCCCEEECCCCCEEEECCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA