Click here to switch to the map view.

The map label for this gene is 209397466

Identifier: 209397466

GI number: 209397466

Start: 4696243

End: 4696680

Strand: Reverse

Name: 209397466

Synonym: ECH74115_5051

Alternate gene names: NA

Gene position: 4696680-4696243 (Counterclockwise)

Preceding gene: 209397108

Following gene: 209398054

Centisome position: 84.29

GC content: 39.04

Gene sequence:

>438_bases
ATGTTTTCTTATATGTATCAGGCACAAAGTAATCTGTCGATTGCAAAGTTTGCTGATATGAATGAGGCATCTAAAGCGTC
AACCACGGCACAAAAGATGGCTAATCTTGTGGATGCCAAAATTGCTGATGTTCAGAGTAGCACTGATAAGAATGCGAAAG
CCAAACTTCCTCAAGACGTGATTGACTATATAAACGATCCACGTAATGACATAAGTGTAACTGGTATTCGTGATCTTAGT
GGTGATTTAAGCGCTGGTGATCTGCAAACAGTGAAGGCGGCTATTTCAGCTAAAGCGAATAACCTGACAACGGTAGTGAA
TAATAGCCAGCTCGAAATTCAGCAAATGTCGAATACATTAAATCTCTTAACGAGTGCACGTTCTGATGTGCAATCTCTAC
AATATAGAACTATTTCAGCAATATCCCTTGGTAAATAA

Upstream 100 bases:

>100_bases
GAGTTCTTCGACATCGACGATCTATGACTTAGGTAATATGTCGAAGGATGAGGTGGTTAAGCTATTTGAGGAACTCGGTG
TTTTTCAGGCTGCGATTCTC

Downstream 100 bases:

>100_bases
CCGGAGATAACTATGCTTAACGTAAATAACGATACCCTGTCTGTAACGTCTGGGGTTAATACCGCCTCGGGTACTTCTGG
TATTACTCAATCTGAAACGG

Product: EspA

Products: NA

Alternate protein names: Translocon EspA; Translocator EspA; T3SS Translocator Protein EspA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MFSYMYQAQSNLSIAKFADMNEASKASTTAQKMANLVDAKIADVQSSTDKNAKAKLPQDVIDYINDPRNDISVTGIRDLS
GDLSAGDLQTVKAAISAKANNLTTVVNNSQLEIQQMSNTLNLLTSARSDVQSLQYRTISAISLGK

Sequences:

>Translated_145_residues
MFSYMYQAQSNLSIAKFADMNEASKASTTAQKMANLVDAKIADVQSSTDKNAKAKLPQDVIDYINDPRNDISVTGIRDLS
GDLSAGDLQTVKAAISAKANNLTTVVNNSQLEIQQMSNTLNLLTSARSDVQSLQYRTISAISLGK
>Mature_145_residues
MFSYMYQAQSNLSIAKFADMNEASKASTTAQKMANLVDAKIADVQSSTDKNAKAKLPQDVIDYINDPRNDISVTGIRDLS
GDLSAGDLQTVKAAISAKANNLTTVVNNSQLEIQQMSNTLNLLTSARSDVQSLQYRTISAISLGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15622; Mature: 15622

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSYMYQAQSNLSIAKFADMNEASKASTTAQKMANLVDAKIADVQSSTDKNAKAKLPQDV
CCCCHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
IDYINDPRNDISVTGIRDLSGDLSAGDLQTVKAAISAKANNLTTVVNNSQLEIQQMSNTL
HHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
NLLTSARSDVQSLQYRTISAISLGK
HHHHHHHHHHHHHHHHHHHHEECCC
>Mature Secondary Structure
MFSYMYQAQSNLSIAKFADMNEASKASTTAQKMANLVDAKIADVQSSTDKNAKAKLPQDV
CCCCHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHH
IDYINDPRNDISVTGIRDLSGDLSAGDLQTVKAAISAKANNLTTVVNNSQLEIQQMSNTL
HHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHH
NLLTSARSDVQSLQYRTISAISLGK
HHHHHHHHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA