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The map label for this gene is yadN [H]

Identifier: 209397435

GI number: 209397435

Start: 160676

End: 161272

Strand: Reverse

Name: yadN [H]

Synonym: ECH74115_0150

Alternate gene names: 209397435

Gene position: 161272-160676 (Counterclockwise)

Preceding gene: 209398080

Following gene: 209396894

Centisome position: 2.89

GC content: 46.06

Gene sequence:

>597_bases
ATGAAAAAAGCACTTCTCGCAGCCGCTCTGGTTATGGCTTCTGGTTCCGCCCTGGCTGTAGATGGTGGTCATATCGACTT
TAACGGTATGGTACAGTCCGGTACCTGTAAAGTGGGTGTGGTAGATACTGGTATGCATAGCGTTACCACTGATGGCGTGG
TTACCCTGGATACTGCGAATGTTACTGATACTTTTGCTGAAGTTAGCGCAACTGCTGTCGGTTTACTGCCGAAAGAGTTC
ATGATTTCTGTTGAGTGTGATCCAGGTGCTCCGAAGAATGCTGAGTTAACTATGGGTTCTGCAAGTTACGCGAACACCAG
CGGTACCCTGAATAACAATATGAACATCACTGTTAACGGTATTGCACCGGCTCAGAACGTAAACATTGCAGTTCATAACA
TGAAAAACAAAGCTGGCGCTGCTGAAATTAAGCAGGTCCATATGAACAACTCTTCTGAAGTTCAGGAACTGACATTAGAC
GCAGAAGGTAAAGGCCAGTACGTATTTAACGCATCTTACGTTAAAGCACCGAACAGCCCGGCTGTAACTGCTGGTCATGT
AACCACTAACGCGCTGTACACCGTTGCTTATAAGTAA

Upstream 100 bases:

>100_bases
TCACACCCGTGATAATTCACCCCTATTACATCCTCCAAAAACTTTGAGTAATATCCGCTCGCAATATTAATTTCATATAA
TTTTTGTAAGGATGCATGTA

Downstream 100 bases:

>100_bases
TTGATGGTGTGTTGAGCATAAGGTTTGCCAGCAGGCAAACCTTATTTTCGCGAATTTAATCTTTCTACAGACAGCAAGGA
GTGCTTATGTTTCCCTTGGT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKKALLAAALVMASGSALAVDGGHIDFNGMVQSGTCKVGVVDTGMHSVTTDGVVTLDTANVTDTFAEVSATAVGLLPKEF
MISVECDPGAPKNAELTMGSASYANTSGTLNNNMNITVNGIAPAQNVNIAVHNMKNKAGAAEIKQVHMNNSSEVQELTLD
AEGKGQYVFNASYVKAPNSPAVTAGHVTTNALYTVAYK

Sequences:

>Translated_198_residues
MKKALLAAALVMASGSALAVDGGHIDFNGMVQSGTCKVGVVDTGMHSVTTDGVVTLDTANVTDTFAEVSATAVGLLPKEF
MISVECDPGAPKNAELTMGSASYANTSGTLNNNMNITVNGIAPAQNVNIAVHNMKNKAGAAEIKQVHMNNSSEVQELTLD
AEGKGQYVFNASYVKAPNSPAVTAGHVTTNALYTVAYK
>Mature_198_residues
MKKALLAAALVMASGSALAVDGGHIDFNGMVQSGTCKVGVVDTGMHSVTTDGVVTLDTANVTDTFAEVSATAVGLLPKEF
MISVECDPGAPKNAELTMGSASYANTSGTLNNNMNITVNGIAPAQNVNIAVHNMKNKAGAAEIKQVHMNNSSEVQELTLD
AEGKGQYVFNASYVKAPNSPAVTAGHVTTNALYTVAYK

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1786334, Length=200, Percent_Identity=39.5, Blast_Score=111, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 20365; Mature: 20365

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALLAAALVMASGSALAVDGGHIDFNGMVQSGTCKVGVVDTGMHSVTTDGVVTLDTAN
CCHHHHHHHHHHCCCCEEEEECCEEEECCEEECCCEEEEEEECCCCEECCCCEEEEECCC
VTDTFAEVSATAVGLLPKEFMISVECDPGAPKNAELTMGSASYANTSGTLNNNMNITVNG
CCHHHHHHHHHEEECCCCHHEEEEECCCCCCCCCEEEECCCCCCCCCCEECCCCEEEEEE
IAPAQNVNIAVHNMKNKAGAAEIKQVHMNNSSEVQELTLDAEGKGQYVFNASYVKAPNSP
CCCCCCCEEEEEECCCCCCHHEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEECCCCC
AVTAGHVTTNALYTVAYK
CEEECCEECCEEEEEEEC
>Mature Secondary Structure
MKKALLAAALVMASGSALAVDGGHIDFNGMVQSGTCKVGVVDTGMHSVTTDGVVTLDTAN
CCHHHHHHHHHHCCCCEEEEECCEEEECCEEECCCEEEEEEECCCCEECCCCEEEEECCC
VTDTFAEVSATAVGLLPKEFMISVECDPGAPKNAELTMGSASYANTSGTLNNNMNITVNG
CCHHHHHHHHHEEECCCCHHEEEEECCCCCCCCCEEEECCCCCCCCCCEECCCCEEEEEE
IAPAQNVNIAVHNMKNKAGAAEIKQVHMNNSSEVQELTLDAEGKGQYVFNASYVKAPNSP
CCCCCCCEEEEEECCCCCCHHEEEEEECCCCCCEEEEEECCCCCCCEEEEEEEEECCCCC
AVTAGHVTTNALYTVAYK
CEEECCEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]