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The map label for this gene is ychJ [H]

Identifier: 209397422

GI number: 209397422

Start: 1655215

End: 1655694

Strand: Reverse

Name: ychJ [H]

Synonym: ECH74115_1718

Alternate gene names: 209397422

Gene position: 1655694-1655215 (Counterclockwise)

Preceding gene: 209399686

Following gene: 209396262

Centisome position: 29.71

GC content: 45.83

Gene sequence:

>480_bases
TTGTTTCCAGGGAGATTATTTGTGTCTCAGCTTTGTCCCTGTGGTAGTGCTGTCGAGTATAGCCTATGTTGCCACCCTTA
TGTGTCTGGTGAAAAGGTTGCACCTGATCCAGAACATCTCATGCGTTCGCGTTACTGCGCTTTTGTGATGCAAGACGCAG
ATTATTTAATAAAGACCTGGCATCCATCTTGTGGAGCAGCGGCGTTACGTGCCGAATTGATTGCCGGATTTGCGCATACT
GAATGGTTGGGATTGACCGTATTTGAACATTGTTGGCAGGACGCCGACAATATCGGATTTGTCAGTTTTGTTGCTCGATT
TACCGAAGGTGGCAAAACAGGTGCAATAATTGAACGTTCGCGATTTTTGAAAGAAAACGGTCAATGGTACTATATTGACG
GTACACGTCCGCAGTTTGGCCGCAACGATCCCTGCCCTTGTGGTTCAGGTAAAAAATTTAAAAAGTGCTGCGGCCAATAA

Upstream 100 bases:

>100_bases
CTTTCTCATTATTCCCGCAAGATTCCCCTGGAATGCAATCGTAGCCACATCGCTACTGCTCGGTTAACATAGTGCTACTC
AGGCGGTTAATACGCCGTTA

Downstream 100 bases:

>100_bases
TGGTTGACGGTACGGTTTAGCAAACACTCTCAACAAGGTTTTTCCAGCAATGCATTCACTCCAACGTAAAGTTCTGCGTA
CTATTTGTCCGGACCAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MFPGRLFVSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAAALRAELIAGFAHT
EWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ

Sequences:

>Translated_159_residues
MFPGRLFVSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAAALRAELIAGFAHT
EWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
>Mature_159_residues
MFPGRLFVSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTWHPSCGAAALRAELIAGFAHT
EWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=152, Percent_Identity=98.6842105263158, Blast_Score=317, Evalue=2e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 17789; Mature: 17789

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
6.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPGRLFVSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTW
CCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEC
HPSCGAAALRAELIAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHH
RFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MFPGRLFVSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQDADYLIKTW
CCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEEEC
HPSCGAAALRAELIAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTEGGKTGAIIERS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHH
RFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA