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The map label for this gene is ybdN [H]

Identifier: 209397402

GI number: 209397402

Start: 1381387

End: 1382619

Strand: Direct

Name: ybdN [H]

Synonym: ECH74115_1385

Alternate gene names: 209397402

Gene position: 1381387-1382619 (Clockwise)

Preceding gene: 209399951

Following gene: 209398255

Centisome position: 24.79

GC content: 51.34

Gene sequence:

>1233_bases
ATGAGTGATACGCTTTTAACCGAAAAAATCCTTACCGGAGAAAATGTTTTGCGTGCTGCAATCGCCCGCATTGAGTGGAT
TTTTGAAACATTTCCGTCGGTATGTCTGTCTTTTTCAGGTGGAAAGGATTCCACCGTGCTTTTCCATCTTGTGGCAGAGG
TGGCCCGCAGGAGAAAACGTCATTTCTCTGTTCTGTTCATTGACTGGGAGGCCCAGTATCGGTGCACCATTGAACATATT
CAGAAGATGCGGGAAATGTACCATGATGTGACGGAAACCTTTTACTGGGTGGCACTTCCCCTGACCACGGTAAACGGCGT
CTCGCAGTTTCAGCCGGAGTGGATATGCTGGGAGCCAGGAGTGACCTGGGTTCGCCAGCCACCGGAAGAGGCCATTACGG
ATATGACATATTTTCCCTTTTTCCGGTATGCCATGACGTTTGAAGAATTTGTTCCGGCATTTTCTTCCTGGTTTGCCGGT
AACCGGTGTGGAGTGGCAGTGCTGACCGGTGTTCGTGCGGATGAATCCCTCAATCGCTTTATGGGGCTGGTGTCTCAGCG
CAAACTGAGATATGCCGATGATAAGCCCTGGACCACGGCATCGCCTGAAGGGTTTTATTACACCATGTATCCGTTGTATG
ACTGGAAAGCCCGCGATATCTGGATATATAACGCCAGAGCTTGTGCCATTTACAATCCTCTGTATGACCTGATGTACCGT
GCCGACGTGCCGTTACGCAACATGCGTGTCTGTGAACCTTTTGGTCCTGAACAACGTAAGGGGCTGTGGCTTTACCATGT
TCTGGAGCCGGAAACCTGGGCCAGGATGTGTGAGCGGGTGTCAGGCGCTGCCAGCGGGGCGCTTTATGCCAATGAAAGCG
GTGCCTATTTTGCCCTGCGTAAACGTATATCAAAACCAGCCCATCATACCTGGCGCAGCTATGCGATGTTCCTGCTGGAT
GTGATGCCGGAAAGAACGGCAGAACATTACCGTAATAAAATTGCTGTCTACCTGCGCTGGTATCAGACGCGGGGCTTCCC
GGATGACATCCCGGATGAACAGGAGAATGACCTGGGGAGCCGGGATATTCCGTCCTGGCGGCGTATCTGTAAGACACTTA
TAAAGAATGATTTCTGGTGCCGGCCCCTCTCCTTCAGTCCGAACAAACCCCGGCACTATGAACGTTATCTGCAGCGTATG
AAAGAAAGGAGGAAGGAATGGGGGATTCTGTGA

Upstream 100 bases:

>100_bases
CTGAAGATTTTTGTTGTTATTATTTATCCCCAAAGCGGTGAGTTATTAATGAAGTTTGCCTGAATGTATAAACAGAATTA
TTCGACATAAAGCCAGGAAA

Downstream 100 bases:

>100_bases
CACCGGAGATAATTGGCAACATGATTCGTCAGTACTTCAGCCAGGAACGACCAGAAGAAGAGACCATACAGGCCCTTAAT
CACCTGCGCAGAGTGCTTCA

Product: IbrA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MSDTLLTEKILTGENVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLVAEVARRRKRHFSVLFIDWEAQYRCTIEHI
QKMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWEPGVTWVRQPPEEAITDMTYFPFFRYAMTFEEFVPAFSSWFAG
NRCGVAVLTGVRADESLNRFMGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKARDIWIYNARACAIYNPLYDLMYR
ADVPLRNMRVCEPFGPEQRKGLWLYHVLEPETWARMCERVSGAASGALYANESGAYFALRKRISKPAHHTWRSYAMFLLD
VMPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRPLSFSPNKPRHYERYLQRM
KERRKEWGIL

Sequences:

>Translated_410_residues
MSDTLLTEKILTGENVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLVAEVARRRKRHFSVLFIDWEAQYRCTIEHI
QKMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWEPGVTWVRQPPEEAITDMTYFPFFRYAMTFEEFVPAFSSWFAG
NRCGVAVLTGVRADESLNRFMGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKARDIWIYNARACAIYNPLYDLMYR
ADVPLRNMRVCEPFGPEQRKGLWLYHVLEPETWARMCERVSGAASGALYANESGAYFALRKRISKPAHHTWRSYAMFLLD
VMPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRPLSFSPNKPRHYERYLQRM
KERRKEWGIL
>Mature_409_residues
SDTLLTEKILTGENVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLVAEVARRRKRHFSVLFIDWEAQYRCTIEHIQ
KMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWEPGVTWVRQPPEEAITDMTYFPFFRYAMTFEEFVPAFSSWFAGN
RCGVAVLTGVRADESLNRFMGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKARDIWIYNARACAIYNPLYDLMYRA
DVPLRNMRVCEPFGPEQRKGLWLYHVLEPETWARMCERVSGAASGALYANESGAYFALRKRISKPAHHTWRSYAMFLLDV
MPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRPLSFSPNKPRHYERYLQRMK
ERRKEWGIL

Specific function: Unknown

COG id: COG3969

COG function: function code R; Predicted phosphoadenosine phosphosulfate sulfotransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786818, Length=402, Percent_Identity=58.4577114427861, Blast_Score=513, Evalue=1e-147,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021845
- InterPro:   IPR002500
- InterPro:   IPR014729 [H]

Pfam domain/function: PF11922 DUF3440; PF01507 PAPS_reduct [H]

EC number: NA

Molecular weight: Translated: 48696; Mature: 48565

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTLLTEKILTGENVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLVAEVARRRKR
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH
HFSVLFIDWEAQYRCTIEHIQKMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWEPG
CEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHEEEEEEHHHHCCHHHCCCCEEEECCC
VTWVRQPPEEAITDMTYFPFFRYAMTFEEFVPAFSSWFAGNRCGVAVLTGVRADESLNRF
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
MGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKARDIWIYNARACAIYNPLYDLMYR
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEHHHHHHHHHHH
ADVPLRNMRVCEPFGPEQRKGLWLYHVLEPETWARMCERVSGAASGALYANESGAYFALR
CCCCCCCCEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCHHHHHH
KRISKPAHHTWRSYAMFLLDVMPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCC
RDIPSWRRICKTLIKNDFWCRPLSFSPNKPRHYERYLQRMKERRKEWGIL
CCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDTLLTEKILTGENVLRAAIARIEWIFETFPSVCLSFSGGKDSTVLFHLVAEVARRRKR
CCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHH
HFSVLFIDWEAQYRCTIEHIQKMREMYHDVTETFYWVALPLTTVNGVSQFQPEWICWEPG
CEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHEEEEEEHHHHCCHHHCCCCEEEECCC
VTWVRQPPEEAITDMTYFPFFRYAMTFEEFVPAFSSWFAGNRCGVAVLTGVRADESLNRF
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHH
MGLVSQRKLRYADDKPWTTASPEGFYYTMYPLYDWKARDIWIYNARACAIYNPLYDLMYR
HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEECCCEEEHHHHHHHHHHH
ADVPLRNMRVCEPFGPEQRKGLWLYHVLEPETWARMCERVSGAASGALYANESGAYFALR
CCCCCCCCEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCEEECCCCHHHHHH
KRISKPAHHTWRSYAMFLLDVMPERTAEHYRNKIAVYLRWYQTRGFPDDIPDEQENDLGS
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCC
RDIPSWRRICKTLIKNDFWCRPLSFSPNKPRHYERYLQRMKERRKEWGIL
CCCHHHHHHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]