| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is napG [H]
Identifier: 209397349
GI number: 209397349
Start: 3074480
End: 3075175
Strand: Reverse
Name: napG [H]
Synonym: ECH74115_3342
Alternate gene names: 209397349
Gene position: 3075175-3074480 (Counterclockwise)
Preceding gene: 209399788
Following gene: 209397253
Centisome position: 55.19
GC content: 59.2
Gene sequence:
>696_bases ATGTCCCGGTCAGCGAAACCTCAAAATGGTCGCCGCCGCTTTCTGCGCGATGTCGTTCGCACAGCAGGCGGGCTGGCTGC CGTGGGTGTGGCGCTGGGGTTACAACAGCAAACCGCACGCGCATCTGGCGTGCGGTTGCGCCCGCCCGGAGCCATAAACG AGAACGCCTTTGCCAGTGCCTGTGTGCGTTGCGGTCAGTGTGTTCAGGCTTGCCCTTACGACACCTTAAAACTGGCGACG CTGGCCTCTGGCCTGTCGGCGGGCACGCCATATTTTGTCGCACGGGATATTCCTTGCGAAATGTGTGAGGACATTCCGTG CGCCAAAGTGTGCCCGAGCGGTGCGCTGGATCGTGAGATTGAATCGATCGACGACGCGCGGATGGGGCTGGTGGTACTGG TGGACCAGGAAAACTGTCTCAACTTTCAGGGGCTGCGCTGCGATGTTTGTTATCGCGAATGCCCGAAAATTGATGAGGCC ATCACCCTGGAGCTGGAGCGCAACACGCGTACCGGTAAGCACGCCCGCTTTCTGCCGACGGTTCACAGCGACGCCTGTAC CGGTTGCGGTAAGTGCGAAAAAGTATGCGTGCTGGAACAACCGGCAATCAAGGTGTTACCGCTGTCACTGGCGAAAGGGG AGTTAGGTCACCATTACCGCTTCGGCTGGCTGGAGGGGAACAATGGCAAATCGTAA
Upstream 100 bases:
>100_bases ACAGCTGGTTAACAAACTAACGCTGGACGCGACCGATCCGCTCTCGAAAGAGACGGACTTCAAGAAGTGCGCGGTCAAAC TGGAGAAGGTGTAAGCCATT
Downstream 100 bases:
>100_bases ACGTGACGCCGGGCGCGAGGCGCTGGAGAAAAAAGGCTGGTGGCGCAGTCACCGTTGGCTGGTGTTACGTCGCCTTTGTC AGTTCTTCGTGCTGGGGATG
Product: quinol dehydrogenase periplasmic component
Products: reduced acceptor; NO3- [C]
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLAT LASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLVVLVDQENCLNFQGLRCDVCYRECPKIDEA ITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS
Sequences:
>Translated_231_residues MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLAT LASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLVVLVDQENCLNFQGLRCDVCYRECPKIDEA ITLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS >Mature_230_residues SRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASACVRCGQCVQACPYDTLKLATL ASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREIESIDDARMGLVVLVDQENCLNFQGLRCDVCYRECPKIDEAI TLELERNTRTGKHARFLPTVHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS
Specific function: Involved in electron transfer (Probable) [H]
COG id: COG1145
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Escherichia coli, GI1788533, Length=231, Percent_Identity=99.5670995670996, Blast_Score=471, Evalue=1e-134,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR004494 - InterPro: IPR006311 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24953; Mature: 24822
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 7.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASA CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCEEECCCCCCCCHHHHHH CVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREI HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCHHHHCCCCCHHHHH ESIDDARMGLVVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPT HHHCCCCCCEEEEEECCCCCCCCCCEEEHHHHHCCCCCCEEEEEEECCCCCCCCEEECCC VHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS CCCCCCCCCCCCCEEEEECCCCCEEEEEEHHCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure SRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGVRLRPPGAINENAFASA CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHCCEEECCCCCCCCHHHHHH CVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMCEDIPCAKVCPSGALDREI HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHCCCCHHHHCCCCCHHHHH ESIDDARMGLVVLVDQENCLNFQGLRCDVCYRECPKIDEAITLELERNTRTGKHARFLPT HHHCCCCCCEEEEEECCCCCCCCCCEEEHHHHHCCCCCCEEEEEEECCCCCCCCEEECCC VHSDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHHYRFGWLEGNNGKS CCCCCCCCCCCCCEEEEECCCCCEEEEEEHHCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Acceptor; nitrite [C]
Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]