| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397260
Identifier: 209397260
GI number: 209397260
Start: 5184897
End: 5185757
Strand: Reverse
Name: 209397260
Synonym: ECH74115_5543
Alternate gene names: NA
Gene position: 5185757-5184897 (Counterclockwise)
Preceding gene: 209397237
Following gene: 209398079
Centisome position: 93.07
GC content: 62.83
Gene sequence:
>861_bases GTGTCTCCCCCGGGTCGCCCTTCGGTCCCTGAGGTCCGGTTGCCCCCACCGGGCCAGTCGCACCTGTTTCTCCTTTCGGT CCCTGTGGGCCTGCCGGGCCTGCCGCACCGGTATCTCCCTTTGGACCCTGTGGACCTGCATTTCCCGTCAGACCGGTCTC TCCCCGCTCTCCCCTGTCACCTTTCGGCCCCTGCGGGCCTGCCGGACCAGCATCACCTGCCGGTCCCCGTTCGCCGGTTG CCCCGACAGGGCCGGTGTCACCGCGCTCTCCCTTATCACCCTTCGGCCCCTGAGGACCCGCGGGCCCCTGTTCCCCCTTT GGCCCGGGAGGTCCCACCACGGTGGGGATTCTGTTTACGGCTTCTTCCGCCGCTATCCTGCTTTGTTCCGCTGACTGTGC GCTTTCTGCTGACTCCCGGGCTTTTTCTGCTGCGGTCGTTGCATCCCTGGATGCATTACCGGCTGCACTTTCTGCCGTCT TTCTTGACAATTCAGCTTCTGCTGCACTTTGTGATGACTCACTGGCTTTTTGAGCGGCCGCAGAGGCCGAGGACGAGGAC GCCTCCTCTGACTGCTTTGCAGCGGCTGCACTTTCTGCCGCCTGCCGGGCTGACTCCGATGCATCCCCTGCTGAAGTGTC AGCATTTGCAGCGTTCTCTTCTGCCTGACTGGCTGATATGCCGGCATTCCTCGCGGACGTCTCCGCCTCTCCGGCATTCT TCTTCGCCTCCTCAGCGTGACGCGCCGCTTCTTCCACCATCAGTTCAAAACGACGCAGTGCCTCCGGCCGGACGTCATCC TCCGACATGGCACCGAGAAAATCATTCAGCGTACCGGGTTGAGAATCTTCATACACGGTGA
Upstream 100 bases:
>100_bases AGAAAGGTCAGTCCGGTGATGAGTGCGCCATCTGTATCCGGGAACCAGCCATTGCTGTTTGTCTCAATAATGTTTCCCGG CCCCAGACGAAAACGGATTT
Downstream 100 bases:
>100_bases TGGTCCCGGCATGTGACGGCGGGAATCCTTCCACCAACAGAATGACGCTGTACTGACCGTACTCAACGTCCATGCTGTAA CGACCGGCTTCATCCGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MSPPGRPSVPEVRLPPPGQSHLFLLSVPVGLPGLPHRYLPLDPVDLHFPSDRSLPALPCHLSAPAGLPDQHHLPVPVRRL PRQGRCHRALPYHPSAPEDPRAPVPPLAREVPPRWGFCLRLLPPLSCFVPLTVRFLLTPGLFLLRSLHPWMHYRLHFLPS FLTIQLLLHFVMTHWLFERPQRPRTRTPPLTALQRLHFLPPAGLTPMHPLLKCQHLQRSLLPDWLICRHSSRTSPPLRHS SSPPQRDAPLLPPSVQNDAVPPAGRHPPTWHRENHSAYRVENLHTR
Sequences:
>Translated_286_residues MSPPGRPSVPEVRLPPPGQSHLFLLSVPVGLPGLPHRYLPLDPVDLHFPSDRSLPALPCHLSAPAGLPDQHHLPVPVRRL PRQGRCHRALPYHPSAPEDPRAPVPPLAREVPPRWGFCLRLLPPLSCFVPLTVRFLLTPGLFLLRSLHPWMHYRLHFLPS FLTIQLLLHFVMTHWLFERPQRPRTRTPPLTALQRLHFLPPAGLTPMHPLLKCQHLQRSLLPDWLICRHSSRTSPPLRHS SSPPQRDAPLLPPSVQNDAVPPAGRHPPTWHRENHSAYRVENLHTR >Mature_285_residues SPPGRPSVPEVRLPPPGQSHLFLLSVPVGLPGLPHRYLPLDPVDLHFPSDRSLPALPCHLSAPAGLPDQHHLPVPVRRLP RQGRCHRALPYHPSAPEDPRAPVPPLAREVPPRWGFCLRLLPPLSCFVPLTVRFLLTPGLFLLRSLHPWMHYRLHFLPSF LTIQLLLHFVMTHWLFERPQRPRTRTPPLTALQRLHFLPPAGLTPMHPLLKCQHLQRSLLPDWLICRHSSRTSPPLRHSS SPPQRDAPLLPPSVQNDAVPPAGRHPPTWHRENHSAYRVENLHTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32576; Mature: 32444
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPGRPSVPEVRLPPPGQSHLFLLSVPVGLPGLPHRYLPLDPVDLHFPSDRSLPALPCH CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC LSAPAGLPDQHHLPVPVRRLPRQGRCHRALPYHPSAPEDPRAPVPPLAREVPPRWGFCLR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHH LLPPLSCFVPLTVRFLLTPGLFLLRSLHPWMHYRLHFLPSFLTIQLLLHFVMTHWLFERP HHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QRPRTRTPPLTALQRLHFLPPAGLTPMHPLLKCQHLQRSLLPDWLICRHSSRTSPPLRHS CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC SSPPQRDAPLLPPSVQNDAVPPAGRHPPTWHRENHSAYRVENLHTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC >Mature Secondary Structure SPPGRPSVPEVRLPPPGQSHLFLLSVPVGLPGLPHRYLPLDPVDLHFPSDRSLPALPCH CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC LSAPAGLPDQHHLPVPVRRLPRQGRCHRALPYHPSAPEDPRAPVPPLAREVPPRWGFCLR CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHH LLPPLSCFVPLTVRFLLTPGLFLLRSLHPWMHYRLHFLPSFLTIQLLLHFVMTHWLFERP HHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC QRPRTRTPPLTALQRLHFLPPAGLTPMHPLLKCQHLQRSLLPDWLICRHSSRTSPPLRHS CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCC SSPPQRDAPLLPPSVQNDAVPPAGRHPPTWHRENHSAYRVENLHTR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA