| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397093
Identifier: 209397093
GI number: 209397093
Start: 1344829
End: 1345191
Strand: Direct
Name: 209397093
Synonym: ECH74115_1337
Alternate gene names: NA
Gene position: 1344829-1345191 (Clockwise)
Preceding gene: 209397483
Following gene: 209398600
Centisome position: 24.14
GC content: 51.52
Gene sequence:
>363_bases ATGGTTAAACTGGCTTCACAACCAGGAGCCTCTGTTGCCCGTATTGCCCGGGAACACGATATCAATGATAACCTCCTGTT CAAATGGCTCAGGCTCTGGCAGAACGAAAGGCGTATATCGCGGCGTCTTCCGGTAACAACCTCTTCTGGCGCTGGCGTTG AATTATTACCTGTTGAGATAACGCCTGATGAGCAGAAAGAGCCTATGGCGGCTCTTACTCCGCTTTTATCCACTCCTTCA CAAAGCACAGTCAGTGCCAGTTCCTGTAAAGTTGAGTTCCGCCACGGTAACATGACGCTGGAAAATCCTTCACCAGAGCT GCTCACGGTGTTGATCCGTGAACTGACCGGGAGGGGACGATGA
Upstream 100 bases:
>100_bases CGTAGGTGCCCACCTTTTCAACTAGTGGACACCTGTTATGGAACAGAAAATATTATCCTCAGAACCCCGCAGATCATTTT CAAATGAGTTTAAACTTCAA
Downstream 100 bases:
>100_bases TCTCGCTCCCATCAGGCACTCGAATCTGGCTGGTTGCCGGCGTTACTGATATGCGTAAATCCTTCAACGGTCTGGGAGAA CAGGTACAACATGTGCTGGA
Product: transposase OrfA, ISEc8
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MVKLASQPGASVARIAREHDINDNLLFKWLRLWQNERRISRRLPVTTSSGAGVELLPVEITPDEQKEPMAALTPLLSTPS QSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR
Sequences:
>Translated_120_residues MVKLASQPGASVARIAREHDINDNLLFKWLRLWQNERRISRRLPVTTSSGAGVELLPVEITPDEQKEPMAALTPLLSTPS QSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR >Mature_120_residues MVKLASQPGASVARIAREHDINDNLLFKWLRLWQNERRISRRLPVTTSSGAGVELLPVEITPDEQKEPMAALTPLLSTPS QSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13315; Mature: 13315
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKLASQPGASVARIAREHDINDNLLFKWLRLWQNERRISRRLPVTTSSGAGVELLPVEI CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEE TPDEQKEPMAALTPLLSTPSQSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR CCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVKLASQPGASVARIAREHDINDNLLFKWLRLWQNERRISRRLPVTTSSGAGVELLPVEI CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEEE TPDEQKEPMAALTPLLSTPSQSTVSASSCKVEFRHGNMTLENPSPELLTVLIRELTGRGR CCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA