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The map label for this gene is rnfH [H]

Identifier: 209396909

GI number: 209396909

Start: 3578125

End: 3578415

Strand: Reverse

Name: rnfH [H]

Synonym: ECH74115_3858

Alternate gene names: 209396909

Gene position: 3578415-3578125 (Counterclockwise)

Preceding gene: 209396556

Following gene: 209400581

Centisome position: 64.22

GC content: 50.86

Gene sequence:

>291_bases
GTGCCAGGTAAAATTGCCGTTGAGGTGGCTTATGCGCTACCTAAGAAGCAGTACCTGCAGCGCGTGACGCTGCAGGAGGG
CGCGACGGTTGAAGAAGCTATTCGCGCCAGTGGCTTGCTGGAATTGCGTACCGATATCGATTTAACTGAAAACAAAGTCG
GCATTTACAGCCGTCCGGCAAAATTAAGCGATAGTGTGCATGATGGCGATCGGGTGGAGATTTATCGCCCTCTCATTGCC
GATCCGAAAGAGCTTCGCAGGCAACGAGCAGAAAAATCAGCGAATAAATAA

Upstream 100 bases:

>100_bases
TTTACCAATAAGTTGATTGAACTCGCTTTTGGTCGCGTGTTTAAAGAGCTGGCGTCTAATATGGTCCAGGCTTTTACGGT
TCGTGCGAAAGAGGTTTACA

Downstream 100 bases:

>100_bases
CGGACAGAAAAAAGGTGCTCATTGAGCACCTTTTTTAACGTCTTTGAGAGCAACTTTATTATTAGTTACCACTCAGCGCA
GGTTTGTTATCAATATTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MPGKIAVEVAYALPKKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTENKVGIYSRPAKLSDSVHDGDRVEIYRPLIA
DPKELRRQRAEKSANK

Sequences:

>Translated_96_residues
MPGKIAVEVAYALPKKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTENKVGIYSRPAKLSDSVHDGDRVEIYRPLIA
DPKELRRQRAEKSANK
>Mature_95_residues
PGKIAVEVAYALPKKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTENKVGIYSRPAKLSDSVHDGDRVEIYRPLIAD
PKELRRQRAEKSANK

Specific function: Unknown

COG id: COG2914

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0125 (rnfH) family [H]

Homologues:

Organism=Escherichia coli, GI87082139, Length=96, Percent_Identity=97.9166666666667, Blast_Score=189, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005346 [H]

Pfam domain/function: PF03658 UPF0125 [H]

EC number: NA

Molecular weight: Translated: 10789; Mature: 10658

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGKIAVEVAYALPKKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTENKVGIYSRPA
CCCCEEEHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
KLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK
CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PGKIAVEVAYALPKKQYLQRVTLQEGATVEEAIRASGLLELRTDIDLTENKVGIYSRPA
CCCEEEHHHHHCCHHHHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCCCCCC
KLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK
CCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA