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The map label for this gene is yjcF [H]

Identifier: 209396870

GI number: 209396870

Start: 5210129

End: 5211421

Strand: Reverse

Name: yjcF [H]

Synonym: ECH74115_5571

Alternate gene names: 209396870

Gene position: 5211421-5210129 (Counterclockwise)

Preceding gene: 209398553

Following gene: 209398875

Centisome position: 93.53

GC content: 32.95

Gene sequence:

>1293_bases
ATGCGCTATAATGGTTTAAATAATATGTTTTTCCCTCTTTGCCTGATTAACGATAACCACTCTGTCACAAGTCTATCACA
TACAAAGAAAACAAAATCAGATAATTACAGCAAACATCATAAAAACACGTTAATTGACAATAAAGCCCTCTCTCTTTTCA
AAATGGATGATCATGAAAAAGTGATAGACTTGATTCAGAAAATGAAAAGAATTTATGATAGTTTACCATCAGGAAAAATC
ACGAAAGAAACGGACAGGAAAATACATAAATATTTTATAGATATAGCTTCATATGCAAATAATAAATGTGACGATAGAAT
TACGAGAAGAGTTTACCTTAATAAAGATAAGGAAGTGTCAATTAAGGTGGTATATTTTATAAATAATGTCACCGTCCATA
ATAATACTATCGAAATCCCACAGACAGTGAATGGTGGTTACGATTTTTCACACCTTAGCCTGAAAGGTATCGTGATTAAA
GATGAAGATTTATCCAATTCGAATTTTGCAGGTTGCAGACTACAAAACGCTATTTTCCAGGACTGTAATATGTATAAAAC
GAATTTTAATTTCGCCATAATGGAAAAAATACTTTTTGATAATTGTATTCTCGATGACTCATATTTCGCTCAGATAAAAA
TGACTGACGGAACTCTAAATTCATGCTCCGCTATGCATGTTCAATTCTACAATGCAACAATGAATAGAGCCAATATTAAA
AATACCTTCCTTGATTATTCAAATTTTTATATGGCATACATGGCTGAGGTAAATCTTTATAAAGTAATAGCGCCATATAT
TAATTTATTTAGAGCCGACCTTAGCTTCTCTAAACTTGATTTAATTAACTTTAAACATGCTGATCTGTCTCGCGTCAATC
TGAACAAAGCAATCCTCCAGAATATAAACTTAATTGATAGTAAACTCTTTTTTACACGGCTAACAAATACGTTCCTCGAA
ATGGTTATATGCACCGATTCTAATATGGCTAATGTTAATTTTAATAATGCCAATTTAAACAATTGCCATTTCAACTGTTC
TGTTTTAACAAAAGCCTGGATGTTTAATACCCGTCTCTATCGGGTTAATTTCGATGAGGCTAGCGTCCAGGGAATGGGCA
TTTCCATTCTCCGTGGGGAGGAGAATATTCCCATTAATAGTGATACCCTGGTAACACTACAGAAATTCTTTGAAGAAGAT
TGTACCTCTCATACTGGCATGTCACAAACTGAGAATAATACTCATGAAGTAGCTATGAAGATTACTGCAGATATTATGCA
ACACGCAGATTGA

Upstream 100 bases:

>100_bases
AATAAACTCATTAAAAAAAAATGAGCGATTTTTGACAGTCGTAGAAAATGATAATGCAGAGAATATGCCTTTTCTTTCTT
GTTAATTATAAGGATATTTT

Downstream 100 bases:

>100_bases
GATTAAGTCGAAGAACAGCCAATGAAATGACTTTAAAAGAGAGATAACTTATTTGTTTTAGAATCATGAATGTTAGCCCG
AGCTAACCTGTTAAAGGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 430

Protein sequence:

>430_residues
MRYNGLNNMFFPLCLINDNHSVTSLSHTKKTKSDNYSKHHKNTLIDNKALSLFKMDDHEKVIDLIQKMKRIYDSLPSGKI
TKETDRKIHKYFIDIASYANNKCDDRITRRVYLNKDKEVSIKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIK
DEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSYFAQIKMTDGTLNSCSAMHVQFYNATMNRANIK
NTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFKHADLSRVNLNKAILQNINLIDSKLFFTRLTNTFLE
MVICTDSNMANVNFNNANLNNCHFNCSVLTKAWMFNTRLYRVNFDEASVQGMGISILRGEENIPINSDTLVTLQKFFEED
CTSHTGMSQTENNTHEVAMKITADIMQHAD

Sequences:

>Translated_430_residues
MRYNGLNNMFFPLCLINDNHSVTSLSHTKKTKSDNYSKHHKNTLIDNKALSLFKMDDHEKVIDLIQKMKRIYDSLPSGKI
TKETDRKIHKYFIDIASYANNKCDDRITRRVYLNKDKEVSIKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIK
DEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSYFAQIKMTDGTLNSCSAMHVQFYNATMNRANIK
NTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFKHADLSRVNLNKAILQNINLIDSKLFFTRLTNTFLE
MVICTDSNMANVNFNNANLNNCHFNCSVLTKAWMFNTRLYRVNFDEASVQGMGISILRGEENIPINSDTLVTLQKFFEED
CTSHTGMSQTENNTHEVAMKITADIMQHAD
>Mature_430_residues
MRYNGLNNMFFPLCLINDNHSVTSLSHTKKTKSDNYSKHHKNTLIDNKALSLFKMDDHEKVIDLIQKMKRIYDSLPSGKI
TKETDRKIHKYFIDIASYANNKCDDRITRRVYLNKDKEVSIKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIK
DEDLSNSNFAGCRLQNAIFQDCNMYKTNFNFAIMEKILFDNCILDDSYFAQIKMTDGTLNSCSAMHVQFYNATMNRANIK
NTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFKHADLSRVNLNKAILQNINLIDSKLFFTRLTNTFLE
MVICTDSNMANVNFNNANLNNCHFNCSVLTKAWMFNTRLYRVNFDEASVQGMGISILRGEENIPINSDTLVTLQKFFEED
CTSHTGMSQTENNTHEVAMKITADIMQHAD

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790502, Length=430, Percent_Identity=96.046511627907, Blast_Score=844, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 49621; Mature: 49621

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYNGLNNMFFPLCLINDNHSVTSLSHTKKTKSDNYSKHHKNTLIDNKALSLFKMDDHEK
CCCCCCCCCEEEEEEECCCCCEEEEHHHCCCCCCCCHHHHCCCCCCCCCEEEEEECCHHH
VIDLIQKMKRIYDSLPSGKITKETDRKIHKYFIDIASYANNKCDDRITRRVYLNKDKEVS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCCCEE
IKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQNAIFQ
EEEEEEEEEEEEECCEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHH
DCNMYKTNFNFAIMEKILFDNCILDDSYFAQIKMTDGTLNSCSAMHVQFYNATMNRANIK
CCCEEECCCCHHHHHHHHHHHEEECCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCH
NTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFKHADLSRVNLNKAILQ
HHHHCHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
NINLIDSKLFFTRLTNTFLEMVICTDSNMANVNFNNANLNNCHFNCSVLTKAWMFNTRLY
CCCHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEEHHHHHHHHEEEEEEE
RVNFDEASVQGMGISILRGEENIPINSDTLVTLQKFFEEDCTSHTGMSQTENNTHEVAMK
EEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEHH
ITADIMQHAD
HHHHHHHCCC
>Mature Secondary Structure
MRYNGLNNMFFPLCLINDNHSVTSLSHTKKTKSDNYSKHHKNTLIDNKALSLFKMDDHEK
CCCCCCCCCEEEEEEECCCCCEEEEHHHCCCCCCCCHHHHCCCCCCCCCEEEEEECCHHH
VIDLIQKMKRIYDSLPSGKITKETDRKIHKYFIDIASYANNKCDDRITRRVYLNKDKEVS
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCCCEE
IKVVYFINNVTVHNNTIEIPQTVNGGYDFSHLSLKGIVIKDEDLSNSNFAGCRLQNAIFQ
EEEEEEEEEEEEECCEEECCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHH
DCNMYKTNFNFAIMEKILFDNCILDDSYFAQIKMTDGTLNSCSAMHVQFYNATMNRANIK
CCCEEECCCCHHHHHHHHHHHEEECCCEEEEEEEECCCCCCCEEEEEEEEECCCCCCCCH
NTFLDYSNFYMAYMAEVNLYKVIAPYINLFRADLSFSKLDLINFKHADLSRVNLNKAILQ
HHHHCHHHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHH
NINLIDSKLFFTRLTNTFLEMVICTDSNMANVNFNNANLNNCHFNCSVLTKAWMFNTRLY
CCCHHHHHHHHHHHHHHHEEEEEECCCCEEEEEECCCCCCCEEEEHHHHHHHHEEEEEEE
RVNFDEASVQGMGISILRGEENIPINSDTLVTLQKFFEEDCTSHTGMSQTENNTHEVAMK
EEECCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEHH
ITADIMQHAD
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]