Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
---|---|
Accession | NC_011353 |
Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is gloB [H]
Identifier: 209396752
GI number: 209396752
Start: 237560
End: 238315
Strand: Reverse
Name: gloB [H]
Synonym: ECH74115_0224
Alternate gene names: 209396752
Gene position: 238315-237560 (Counterclockwise)
Preceding gene: 209396174
Following gene: 209397531
Centisome position: 4.28
GC content: 40.48
Gene sequence:
>756_bases ATGAATCTTAACAGTATTCCCGCCTTTGATGACAATTACATCTGGGTTTTGAATGATGAAGCAGGTCGCTGCCTGATTGT CGATCCCGGAGACGCAGAGCCAGTATTAAACGCCATTGCCGCCAATAACTGGCAACCGGAGGCCATATTTCTCACCCACC ATCATCACGATCACGTTGGCGGCGTAAAAGAACTGGTGGAAAAGTTTCCGCAAATTGTGGTGTATGGTCCACAAGAGACA CAAGATAAGGGAACAACACAGGTAGTCAAAGATGGCGAAACTGCCTTCGTTTTGGGGCATGAATTTAGTGTAATTGCCAC GCCGGGTCACACTTTAGGACATATCTGTTACTTCAGTAAACCTTATCTATTTTGCGGCGACACGCTGTTTTCTGGTGGGT GTGGTCGGTTGTTTGAAGGGACAGCATCACAAATGTATCAATCACTTAAAAAGTTAAGTGCGTTACCTGACGATACATTG GTATGTTGTGCTCATGAATATACGTTATCAAATATGAAGTTTGCTTTGAGTATTCTTCCGCACGATTTGTCCATAAATGA TTATTATCGTAAAGTTAAGGAGTTACGGGCAAAAAATCAAATAACACTACCCGTAATTCTGAAAAATGAGCGGCAAATTA ATGTTTTTTTAAGAACGGAAGATATTGATTTAATTAATGTAATTAATGAAGAAACATTATTGCAACAACCTGAAGAGCGT TTTGCATGGTTAAGGTCAAAGAAAGATAGGTTCTGA
Upstream 100 bases:
>100_bases CTCCCCAGGGCAAATCGCCCCAGCGATCAGGAGCCACGACAGTTTGAGGGACTCTTGCCGGTTTCATCACAACCTTCCGT TTCACACTGAGAGGTAATCT
Downstream 100 bases:
>100_bases TAAAACTTTCTTGTCATCGGCTCCGTTCGCCGTTATGATCGGTCGTCTTTTAAGCAACTATTGACGCACACATGAAGGCA AAAGCGATATTACTCGCCTC
Product: hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQET QDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEER FAWLRSKKDRF
Sequences:
>Translated_251_residues MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQET QDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEER FAWLRSKKDRF >Mature_251_residues MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQET QDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTL VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEER FAWLRSKKDRF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538320, Length=260, Percent_Identity=34.2307692307692, Blast_Score=147, Evalue=1e-35, Organism=Homo sapiens, GI94538322, Length=260, Percent_Identity=34.2307692307692, Blast_Score=146, Evalue=1e-35, Organism=Homo sapiens, GI14150041, Length=229, Percent_Identity=35.3711790393013, Blast_Score=133, Evalue=1e-31, Organism=Homo sapiens, GI116642887, Length=232, Percent_Identity=35.3448275862069, Blast_Score=128, Evalue=5e-30, Organism=Homo sapiens, GI21703352, Length=232, Percent_Identity=35.3448275862069, Blast_Score=128, Evalue=6e-30, Organism=Homo sapiens, GI46361987, Length=198, Percent_Identity=37.3737373737374, Blast_Score=122, Evalue=3e-28, Organism=Escherichia coli, GI1786406, Length=251, Percent_Identity=100, Blast_Score=526, Evalue=1e-151, Organism=Escherichia coli, GI1787158, Length=193, Percent_Identity=30.0518134715026, Blast_Score=70, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17536925, Length=227, Percent_Identity=32.5991189427313, Blast_Score=122, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6320478, Length=231, Percent_Identity=33.3333333333333, Blast_Score=99, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6324614, Length=231, Percent_Identity=29.8701298701299, Blast_Score=85, Evalue=1e-17, Organism=Drosophila melanogaster, GI21356335, Length=261, Percent_Identity=35.632183908046, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI24667711, Length=261, Percent_Identity=35.632183908046, Blast_Score=152, Evalue=2e-37, Organism=Drosophila melanogaster, GI24667703, Length=261, Percent_Identity=35.632183908046, Blast_Score=152, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28435; Mature: 28435
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVG CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSK HHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCEEEEEECCEEEEECCCCHHEEEEEECC PYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILP CEEEECCCHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCEEEEEECC HDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEER CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCEEEECCCHHHHHCCHHHH FAWLRSKKDRF HHHHHHCCCCC >Mature Secondary Structure MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVG CCCCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC GVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYFSK HHHHHHHHCCCEEEECCCCCCCCCCEEEEECCCEEEEEECCEEEEECCCCHHEEEEEECC PYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILP CEEEECCCHHCCCCCHHHCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCCEEEEEECC HDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTEDIDLINVINEETLLQQPEER CCCCHHHHHHHHHHHHHCCCEEEEEEEECCCEEEEEEEECCCEEEECCCHHHHHCCHHHH FAWLRSKKDRF HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA