| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209396536
Identifier: 209396536
GI number: 209396536
Start: 2819139
End: 2819486
Strand: Reverse
Name: 209396536
Synonym: ECH74115_3038
Alternate gene names: NA
Gene position: 2819486-2819139 (Counterclockwise)
Preceding gene: 209399626
Following gene: 209400245
Centisome position: 50.6
GC content: 56.03
Gene sequence:
>348_bases ATGACAGCGCGTTATCTCGGAATGAATCGCAGTGATGGCCTGACTGTCACTGACCTTGAGCATATCAGCCAGAGTATCGG CGATATCCTGCGTACACCGGTCGGCTCACGGGTGATGCGTCGTGATTACGGCTCGTTGCTGGCATTAATGATTGACCAGC CGCAGACCCCGGCGCTTGAGTTGCAGATTAAGGTCGCCTGTTACATGGCGGTGCTGAAATGGGAACCCCGCGTCACCCTG TCATCCGTCACTACTGAGCGCAGTTTTGACGGGCGAATGACGGTCACGTTAACCGGCCAGCACAACGACACCGGCCAGCC ACTTTCGTTAACCATCCCTGTGAGTTGA
Upstream 100 bases:
>100_bases GCAACATTGAACACACCGGTGGTGAACTCTCATCAAACGGTAAGGTACTGCATACCCATAAACACCCCGGCGACAGCGGC GGCACAACCGGGAGTCCTTT
Downstream 100 bases:
>100_bases AACCATGCCGATTATCGACCTGAACCAGCTACCCGCACCGGATGTGGTCGAGGAGCTGGACTTTGAAACCATTCTTGCCG AACGCAAGGCGACACTGATT
Product: baseplate assembly protein GpW
Products: NA
Alternate protein names: Baseplate Assembly Protein W; Phage Baseplate Assembly Protein; GPW/Gp; Phage-Related Baseplate Assembly Protein; Baseplate Assembly Protein GpW; Pyocin R2_PP Baseplate Protein; Bacteriophage P2 Baseplate Assembly Protein GPW; Bacteriophage Baseplate Assembly Protein W; Phage Baseplate Assembly Protein W; Phage P2 Baseplate Assembly W Protein; Phage P2 Baseplate Assembly GpW-Like Protein; Phage-Related Baseplate Protein; Phage Protein Gp; Baseplate Assembly Protein; Prophage LambdaW1 Baseplate Assembly Protein W; GpW/GP25 Family Protein; Bacteriophage Protein; Prophage Baseplate Protein; Phage Baseplate Assembly; Baseplate Assembly Protein W Prophage
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYGSLLALMIDQPQTPALELQIKVACYMAVLKWEPRVTL SSVTTERSFDGRMTVTLTGQHNDTGQPLSLTIPVS
Sequences:
>Translated_115_residues MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYGSLLALMIDQPQTPALELQIKVACYMAVLKWEPRVTL SSVTTERSFDGRMTVTLTGQHNDTGQPLSLTIPVS >Mature_114_residues TARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYGSLLALMIDQPQTPALELQIKVACYMAVLKWEPRVTLS SVTTERSFDGRMTVTLTGQHNDTGQPLSLTIPVS
Specific function: Unknown
COG id: COG3628
COG function: function code R; Phage baseplate assembly protein W
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12722; Mature: 12591
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYGSLLALMIDQPQTPALE CCCEECCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEECCCCCCEEE LQIKVACYMAVLKWEPRVTLSSVTTERSFDGRMTVTLTGQHNDTGQPLSLTIPVS EEEEHHEEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECC >Mature Secondary Structure TARYLGMNRSDGLTVTDLEHISQSIGDILRTPVGSRVMRRDYGSLLALMIDQPQTPALE CCEECCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEECCCCCCEEE LQIKVACYMAVLKWEPRVTLSSVTTERSFDGRMTVTLTGQHNDTGQPLSLTIPVS EEEEHHEEEEECCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA